KEGG   Vibrio crassostreae: IS519_01220
Entry
IS519_01220       CDS       T08776                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
vcra  Vibrio crassostreae
Pathway
vcra03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vcra00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    IS519_01220 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vcra02044]
    IS519_01220 (tssH)
Secretion system [BR:vcra02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   IS519_01220 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_22 AAA_16 nSTAND3 AAA_33 Zeta_toxin AAA_7 RNA_helicase ABC_tran_CTD RuvB_N TniB Sigma54_activat NACHT DUF3987 AAA_18 Torsin Rad17 SRP54 NBD_SMAX1 Hpr_kinase_C CENPH DUF2730
Other DBs
NCBI-ProteinID: UPR29932
LinkDB
Position
1:complement(309246..311858)
AA seq 870 aa
MTQVTLTNLVGKLSPELKQALEASAGAAMNQGVGAIETEHWILQLISQKDPKLMALCESQ
KLSLDALVNELSKKISMLPKGSEGQPTLSHGLTELIKDAWMIASVNYGHGEIVSLHLIQA
LMQQNVLGVSTLQLETLSSVSLESLQGLIKKTPIARNSAAPSAGGSVDTTPAGNDALSKY
TVNLTQQAIDGNIDPISGRNAEVRKSIDILCRKRQNNPIMVGEPGVGKTAVVEGLALRIA
ADEVPSALQGVQIHSLDLGLLQAGASVKGEFENRLKDVINEVKSSEVPIIVFIDEAHTLI
GAGGAAGQNDAANLLKPALARGEFKTIAATTWAEYKKYFEKDPALTRRFQVVTIEEPNAE
DAMQMLRGVAASLQAHHGAFIAESAIEAAVNLSIRYLPSRQLPDKAISLLDTASARIALT
QGAKPEVLETLEQTIRYQENEKSALEKEDALFSNSAELIKELTQSIEENQQALSAYYTRW
EKEIELVDQIKSVQQEITEEQEQDAVDANKQKQLDTLRTELADLQGEEPLVYAMVDDNTI
AQVIANWTGIPVGNMMSDEIAKLLTLEDELNTRVIGQDVAKNELAKAIRISRAGLTDNRK
PIGVFLMCGPSGVGKTETAMALAEQLYGGSNDLTVINMTEFKEEHKISMLLGSPAGYVGF
GEGGVLTEAIRRNPYSVLLLDEMEKAHPGVHDLFYQIFDKGHIKDSEGRTVDFKNTIIIM
TSNAADQAICDVCAKTTDRIDNDELLEAIRPDLQLYFKPAFLGRTTIVPYYPLNDEELAK
ITEISLNRIKKKLAEQYQASFTWDADFIQFVVDRNTDPTTGGRAVEQIINRSLMPRLAEE
CIGRLSRSEPITQVTVSATNNSADFDLSIK
NT seq 2613 nt   +upstreamnt  +downstreamnt
atgacacaagtaactctcactaacttagtaggaaagctatctcccgaactgaagcaagcg
ttggaagcgtctgcgggcgcggcgatgaaccaaggtgttggagcgatagaaacagaacac
tggatccttcagcttatttcccaaaaagatccgaagctaatggcgttgtgcgaatctcaa
aagctatcattagacgccttagtgaatgagctttccaaaaaaatatctatgcttccaaaa
ggcagcgaaggtcagccgacactaagccatggcttaactgaattaatcaaagatgcttgg
atgattgcatcggtaaactatggtcatggcgaaatcgtcagcttgcatctaattcaagct
ttgatgcaacagaatgtgttaggcgtaagcaccctacaactagaaacgctgagcagtgtt
tcgctcgaatctctgcaaggtctgataaagaaaacccctattgcccgcaattctgcagcg
ccttcagccggtggttctgtcgatactaccccagcaggtaacgacgcactgagcaagtac
acggtaaatctgactcaacaagcgattgacggcaatatcgatcctatttctggccgtaat
gcggaagtaagaaaatcgattgatatcttgtgtcgtaaacgccaaaacaacccgattatg
gtcggtgaacccggcgtaggtaaaaccgctgttgttgaaggcttagcgttaagaattgca
gccgacgaagtccctagtgctctacaaggcgtacagatccactctttagaccttggctta
ctgcaagctggtgcgagcgttaaaggtgagtttgagaaccgcctgaaagatgtcatcaac
gaagtgaaaagctctgaagtgccgatcatcgtgttcatcgatgaagcccatacgctcatt
ggtgctggcggcgctgccggacaaaacgatgcagccaaccttctaaagccagctctggca
cgtggtgagttcaaaacaattgccgcaacaacatgggccgaatacaagaagtactttgaa
aaagacccagcactaacacgccgcttccaagttgtgaccattgaagagccaaacgccgaa
gatgcaatgcaaatgcttcgtggtgtagccgcttcattgcaagctcaccatggcgctttt
attgctgaatccgcgattgaagcggcggtcaacttatcgattcgttacctgccaagtcgc
caactgccagacaaagcgattagcctgcttgatactgccagtgcacgaatcgcactgaca
caaggcgcgaaaccagaagtattggaaacgttagaacaaaccattcgttaccaagaaaac
gagaagtcggcgttagaaaaagaagatgcactgttctcaaatagcgctgaattgatcaaa
gagctcacacaatcaatcgaagaaaaccaacaagcattgtcagcgtattacacgcgctgg
gaaaaagagattgagttagttgaccaaatcaaatcggttcaacaggagatcactgaagaa
caagagcaagatgctgtcgacgctaacaagcaaaaacagctcgacaccctgcgtactgaa
ttggccgacctgcaaggtgaagaaccccttgtttacgccatggtagatgacaacaccatt
gctcaagtgattgcgaattggacaggtattcctgttggcaacatgatgagtgatgaaatc
gccaagctgctgaccttagaagacgagcttaatactcgagttattggtcaagatgtcgcg
aaaaacgagcttgcaaaagcgattcgcatatcacgcgctgggttaaccgataatcgtaaa
ccgattggtgtgttcctgatgtgtggtccgagtggtgtgggtaaaactgaaaccgccatg
gcacttgcggagcaactgtacggaggtagcaacgaccttacagtgattaacatgaccgag
tttaaagaggagcataagatttcgatgctactcggctcacctgctggctatgtcggcttt
ggtgaaggcggtgtgttaacggaagctatccgacgtaacccatactcagtgctactgttg
gatgagatggagaaagcacaccctggcgtgcatgacctgttctatcaaattttcgataaa
ggccatatcaaagacagtgaaggccgaactgtcgatttcaaaaacaccatcatcatcatg
acgtcgaacgcagctgaccaagctatctgtgatgtgtgcgctaaaaccacagaccgtatc
gacaacgacgagctacttgaagcaattcgtccagatctacagctgtactttaagcccgct
ttcttaggacgaaccaccattgtcccttactacccgcttaacgatgaagaattagcgaaa
atcactgagatctcgctaaatcgaatcaagaagaaactcgcagaacaatatcaagcttcc
tttacttgggacgcagacttcattcaattcgtggttgaccgtaataccgatccaacaaca
ggtggccgtgcagtcgaacaaatcattaaccgctcattgatgccgaggttagctgaagag
tgtattggaaggctaagccgaagcgaacctattactcaagtcaccgttagcgcaaccaac
aatagtgctgacttcgatttatcgattaaatag

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