KEGG   Vibrio crassostreae: IS519_01245
Entry
IS519_01245       CDS       T08776                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
vcra  Vibrio crassostreae
Brite
KEGG Orthology (KO) [BR:vcra00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vcra02044]
    IS519_01245 (tssC)
Secretion system [BR:vcra02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   IS519_01245 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 HEPPP_synt_1 Myb_DNA-bind_3
Other DBs
NCBI-ProteinID: UPR29937
LinkDB
Position
1:complement(316502..317980)
AA seq 492 aa
MSTETENQAQPEAAEGSLSFLDRAIEATTQTPADTTKELFSVLTEQALSGTVTWDKNVTK
TIENAISEIDKKLSQQLSEVMQQKDLQKLEGSWRGLQKLVKESELGRDLKIKMVDYTQEE
LLDQFEDAPAIDRSPLFNAVYQGEFGTAGGEPYGTFIGDYEFSAKDEDVALLRYMGEVAA
ACHAPFVAAANAEMFEFNDFQTFSEGKPVAAGFDSPAYAAWNSFRESDDARYVTLTLPRT
LARLPYGDKGLSTDVFAYEELGTDMDGNPKPTSNDQLVWSNAAYDLGLKMTQAYTASGWC
TSIRGLDNGGKVENLPNLTYKSEAGDLLQQCPTEVNLTDEREKELSDLGFLPLVHYKSSN
YAVFIGGQTTQKPKTFTDPDATANAAISARLPYIMASSRIAHYLKVMGRDKLGSNLEAPD
IKRELQLWIDQYTNAGAIGNEQRAKTPLCESRIEVVEQPGKPGAYSAVAHLRPWLQLEEL
TTSVRMVAKIPG
NT seq 1479 nt   +upstreamnt  +downstreamnt
atgagtactgaaactgagaatcaagcgcagccggaagcagcggaaggctcactgagcttc
ctagaccgtgcgattgaagcaaccactcaaactcctgcagacacgacaaaagaactgttt
tctgtacttacagaacaagctctttctggcaccgtgacgtgggataagaacgttacaaaa
acaattgaaaacgcaatctcagagatagacaagaagctatctcaacagttatctgaagtc
atgcaacaaaaagacttacagaagcttgaaggctcttggcgtggtctacaaaaactcgtt
aaagagagcgaacttggtcgtgatctaaagatcaagatggtcgattacactcaagaagag
ctgcttgatcaatttgaagatgcgccagcgattgaccgtagcccgttattcaatgcggtt
taccaaggtgagtttggtacagcgggtggtgaaccatacggcacattcatcggtgattac
gagttcagcgcgaaagatgaagatgttgctctacttcgctacatgggtgaagttgctgca
gcgtgtcacgcacctttcgtggctgctgccaatgctgagatgttcgagtttaatgacttc
caaacattctctgaaggcaagcctgttgctgcaggtttcgactctcctgcttacgctgca
tggaattcattccgtgagagtgatgacgctcgctacgtaaccctaacactgccacgaact
cttgctcgcctaccttatggtgacaaaggtttgagtactgatgtcttcgcttatgaagag
cttggtactgatatggacggcaatcctaaaccaaccagcaatgatcagttagtttggtct
aatgctgcgtacgatctgggtcttaaaatgactcaagcttacacggcttcaggttggtgt
acgtctattcgtggtctggataacggtggtaaggtcgagaaccttccaaacctaacgtac
aagtctgaagcgggcgacctacttcagcagtgtccaacagaagttaacctaacggatgag
cgtgaaaaagagctatctgaccttggtttccttcctttggttcactacaaaagctctaac
tacgctgtgttcattggcggtcaaacaactcagaagcctaaaaccttcacggacccagat
gcaacggcaaacgcggcaatttcagctcgtctgccttacatcatggcaagtagccgtatc
gcccactacctgaaagtaatgggtcgcgacaagttaggctcgaatcttgaagctccggat
atcaaacgagagctacaactatggatcgaccaatacaccaacgcgggtgctattggtaat
gagcaacgtgcaaaaacccctctttgtgaatctcgcattgaagtggtcgagcaaccgggt
aagccaggcgcatactcagctgtcgctcatctaagaccttggttacaacttgaagaactg
acgacttcagttcgaatggttgccaagattccaggctaa

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