Vibrio crassostreae: IS519_01350
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Entry
IS519_01350 CDS
T08776
Name
(GenBank) GGDEF domain-containing protein
Organism
vcra
Vibrio crassostreae
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Ortholog
Paralog
GFIT
Motif
Pfam:
GGDEF
TPR_12
TPR_2
TPR_8
TPR_10
TPR_1
TPR_NPHP3
RMD1-3
TPR_SusR
CFAP70_TPR_C
TPR_16
TPR_MalT
TPR_INTS8_3
DUF2753
MYCBP_helical
Motif
Other DBs
NCBI-ProteinID:
UPR29956
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Position
1:complement(342495..344522)
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AA seq
675 aa
AA seq
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MNHFVFVTFLLFTSFCSYSQVSTSDRDHNSPVYTSNLSSTPNADWNALYLSTLNHSPERA
LNMLQTRYIGSTVYGDKLYLASLLYQYMSHRDQPFYGIASNDSDYQAMETAFISALMKDG
KGQYEQAQQGFLTLLARMQSRSDLTGKALLKYQLCRSLNEQAKYHQANYYCSALQSDLHD
IADPVLPKFGTYRVIANNHHFRSDYQAALDTYLSLINVFPQGHDISGVYNDVGNLLKELK
QYEKSVEYLKEALILRTNASDLMKAQVHHSLADLYLNQEQSDLAIHHFQTARTLLSSSSH
SYGIALTSLGLGKAYTQTKDYDVARAYLIESLSASSELSNDVIRINAYLAISDMFEEQKL
PTEALNYAQQALEIAEQVTRHKYIAQSLLQLSDIHQSLGDYQQAFYFYQRYSSIQMEARD
IDNRLALEALGLTHAKYEQELESSFLTHQTKLDRVQIEKMEHQRWMYNIVVILLLCAASF
TVLINKTVRAKAAIDGLTKAYSRTEIIRRIKRVKRCKGTDKQHVLVLLDLDKFKKINDEH
GHPTGDRALVHISDQIRKHLVNGELFGRLGGEEFVIMLTDTPPAEVRERVEELHYAISST
VFLSESKKSLNVTASFAYLATSNALSDFDDLYSVLDQALYQAKSNGRNCIIDAYNEPIDL
PEIIYSQPVCEPTQP
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcacttcgtttttgttacctttctactattcactagcttttgttcttatagccaa
gtatcaacatcagatcgtgaccacaattcaccagtctatacctccaatttaagctcgact
ccaaatgctgattggaacgcgctttatctctctactttaaaccactcgcctgagcgcgca
ttaaacatgctgcaaacacgctacatcgggtcaacggtttatggagataagctttacctt
gcgtctcttctgtatcaatacatgagccaccgagatcagccgttctacggaatcgcttca
aacgacagcgactaccaagcgatggaaacagcgtttatttctgccctgatgaaagacggc
aaaggccagtatgaacaagcacagcaaggctttctaacactcttggcgagaatgcaatct
cgcagtgatttaactggtaaagccttactaaagtaccagctatgccgatcgcttaacgag
caagctaaataccatcaagcgaactattactgctctgcccttcagtcagatttacatgac
atcgctgaccctgtattaccaaaattcgggacttatcgagtcatcgcgaacaatcatcat
ttccgcagtgactatcaagctgcactagacacctacctatcactaataaacgtgtttcca
caaggacatgatatttcaggggtttacaacgatgtgggtaacttgctcaaagaattaaag
caatatgaaaaatcggtggagtatctaaaggaagctctcattctcagaacaaacgcttca
gatttaatgaaagcacaagtgcatcacagccttgcggatctctacctcaaccaagagcaa
agtgacctagcaattcatcactttcagacagcaagaacactgttgagctcatcgtcgcat
agttacggtatcgcactcacaagtcttggcttaggaaaggcgtacactcaaacgaaagac
tatgatgtggcgagagcctacctaatcgagtctctttcagcttcgagcgaactgagtaat
gatgtcattcgcatcaatgcttacttggcgatcagcgacatgttcgaagaacagaaactg
ccaacggaagcgctcaactatgctcaacaagcgctagaaatagcagaacaagtcacaagg
cataaatacatcgcgcagtcacttctgcagctttctgatattcatcaatcactcggcgat
taccaacaagctttctatttctaccagcgatactcgtcaatacaaatggaagctagagac
atcgataatcgactcgcactcgaagcgctcggcctgacgcacgccaaatatgagcaggaa
ctggaaagctctttcctgacacatcaaacgaaactcgaccgcgttcaaattgaaaaaatg
gaacatcaaagatggatgtacaacatcgttgttattctattgctttgcgctgcaagcttc
acggtattgataaacaaaacggttcgcgcaaaagcagcaattgatggcttaacgaaagca
tatagccgaactgagataattcgaagaatcaaaagagtgaaacgctgtaaagggacggac
aaacagcatgtgctcgtgctgctcgatctagataagtttaagaagattaatgatgagcat
gggcaccctactggtgatcgcgcactggtccatattagtgatcaaattagaaaacactta
gtgaatggtgaattatttggtcgcttagggggtgaagaatttgtcatcatgttaaccgat
accccaccagcagaggtacgagaacgcgttgaagagttgcactacgcaatttcaagcact
gtcttcttatcagaaagcaaaaagtcacttaatgtgaccgcgagttttgcttatctagca
acctcaaacgcattaagtgactttgacgacttgtattcagtgcttgaccaagcgctctat
caagccaaaagcaacggtcgaaactgtattattgatgcatataacgaaccgattgattta
ccagagattatttattctcagcctgtttgcgaaccaactcagccataa
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