Vibrio crassostreae: IS519_02675
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Entry
IS519_02675 CDS
T08776
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
vcra
Vibrio crassostreae
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcra03400
]
IS519_02675 (sbcD)
DNA repair and recombination proteins [BR:
vcra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IS519_02675 (sbcD)
Archaeal homologous recombinant proteins
IS519_02675 (sbcD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
UPR30207
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Position
1:complement(599716..600969)
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AA seq
417 aa
AA seq
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MKILHTSDWHLGQNFYNKSRKNEHERFLQWLLEQVTEHDIDAIIVAGDIFDTSTPPSYAR
EMYNKFVVDSNKIGCQLVLLGGNHDSVSVLKETQQLLKYMGADVIPNTNEDHATQVVELK
GKNGDVEALVCAIPFIRPRDVLTSQAGVTGVERQKQLGDAIKQHYQSVYDAAVAKRATFE
NSEHMPIIATGHLTAMGVQQSDSVRDIYVGNLDGFAADGFPDADYIALGHIHRPQVVAKR
EYIRYSGSPIPLSFDELKSQKQVCVVEFVEGERTISQLPVPTFQPLAEIKGDLSEIESQL
NQYIGLDSDQSVWLSIEVQAQDYLSDLQERMRSLTNGLNVEVLQLRRARERRNQALEQES
AETLSELSPMDVFTKRIALEEFETDSEKARLERMTVKFKQVMVEVSESAQVPNKVEE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaagattcttcacacgtccgattggcaccttggccaaaacttctacaataaaagccgt
aagaatgaacatgaacggtttttacaatggttacttgagcaagttacagagcacgacatc
gacgcgatcattgttgctggcgacattttcgataccagtacaccgccgagttacgctcgt
gagatgtataacaagttcgtggtcgactcgaacaaaatcggctgccaattggtgttatta
ggtggaaatcacgattcagtctctgtgcttaaagagacgcaacagttactcaaatacatg
ggtgccgacgtgattcctaataccaatgaagatcatgcgactcaggttgtcgaactaaaa
ggcaagaatggcgatgtagaagcgctggtttgtgccattccttttattcgtcctcgcgat
gtgttgaccagtcaggcaggtgtcactggtgttgagcgtcagaagcaacttggtgatgcg
attaaacagcactaccaaagtgtttatgatgcggcggttgctaaacgtgcgacgtttgaa
aacagcgagcacatgccgatcatcgctaccggccacttaactgcgatgggtgttcaacaa
tcggattcggtacgtgatatctatgtcggcaaccttgatggtttcgccgctgatggcttc
ccagacgcagactatatcgcacttggtcatatccatcgcccacaagtggtggcaaagcgt
gaatacattcgttattcaggctctccaatcccactaagttttgatgaacttaagtctcag
aaacaagtgtgtgttgttgagtttgttgaaggtgagcgcaccatttctcaattgcctgtt
cctacattccaaccactagctgaaatcaaaggtgacttgagcgagattgaatctcagctt
aaccaatacataggtttagatagcgaccaaagcgtgtggttatcgatagaagtgcaagcg
caagattacttgtcggatctacaagagcgcatgcgttcattaactaacggtttgaatgtg
gaagtacttcaattgcgccgcgcaagagagcgtcgcaatcaagcattagagcaagagtcg
gcagaaacgctgtcagaattgagcccgatggacgtgtttacgaagcgtattgccttggaa
gagtttgaaaccgactctgaaaaagcacgtttagagcgcatgacggtgaagtttaaacaa
gtgatggttgaagtgtccgagagcgctcaagtgccaaacaaagtagaagagtaa
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