Vibrio crassostreae: IS519_03120
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Entry
IS519_03120 CDS
T08776
Symbol
rlmF
Name
(GenBank) 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF
KO
K06970
23S rRNA (adenine1618-N6)-methyltransferase [EC:
2.1.1.181
]
Organism
vcra
Vibrio crassostreae
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcra03009
]
IS519_03120 (rlmF)
Enzymes [BR:
vcra01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.181 23S rRNA (adenine1618-N6)-methyltransferase
IS519_03120 (rlmF)
Ribosome biogenesis [BR:
vcra03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
IS519_03120 (rlmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_10
MTS
UPF0020
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
UPR30291
LinkDB
All DBs
Position
1:complement(705545..706846)
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AA seq
433 aa
AA seq
DB search
MSQSQNRTTLSLSKNSTSSAKTKDNQAKEGSDKRISTKNTSDKSRKNSVPKGAGNNKAKR
PFAKDSKGKPGSNKGSSNKGSFNKTAFNKNAAQKRRSAEKPQGGLHPRNQHTGRYDFELL
VAALPELKEHLIKNPVGEDTINFSDPLAVKLLNKALLAHHYGVKHWDIPAGYLCPPIPGR
ADYIHRVADILNSDGQGEPYNHASVKALDIGVGANCIYPIIGATEYKWRCTGTDVDSVSI
KTANFIAESNPNLKGKIRARLQADSESIFKGVIKDNERYDVTICNPPFHSSLEEAEKGSQ
RKLDNLAANRAKKAGQSFKPETNKKPVKLDKSTKHDKPTLNFGGQKAELWCPGGEAAFIM
KMARESQLFATQVLWFTTLISKKDNVDMVRSELGKLRAKQVKVVEMSQGQKVSRFIAWTF
MDDEQRQEWIALK
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagccaatcacaaaatagaacgacgctaagcctgtcgaaaaacagcacttcatcagca
aaaacaaaagacaaccaagctaaagaaggcagcgacaagcgtatttctacaaagaacaca
tctgataaaagccgcaagaatagtgtccctaaaggcgctggcaataacaaagcaaagcga
ccttttgcaaaagacagcaaaggcaaaccgggttcgaataaaggatcatcgaataagggt
tctttcaataaaacggcttttaacaagaacgcagctcagaaaagacgttcggctgaaaaa
cctcaaggtggattacacccaagaaaccagcacactggtcgttatgacttcgagttgttg
gttgcagccttgcctgagctaaaagagcatctgatcaagaatccagtgggtgaagacacc
attaatttctctgatccattggccgttaagctactcaacaaagctttgttggcgcatcac
tatggcgttaaacattgggatattcctgcaggttacttgtgtccgccaattcctggccgt
gcagactacattcacagagtggcagacatccttaatagcgatggccaaggtgaaccctat
aaccacgcgtctgtgaaagcattagatattggtgtcggtgcaaactgtatctacccaatc
attggtgcgacagagtataagtggcgttgtacagggaccgatgtcgattcagtctccatc
aaaacagcgaacttcatagcggaaagtaaccctaatctaaaaggtaagatccgagctcgt
ctgcaagcggactctgaatctatctttaagggcgtgattaaggataatgaacgttacgat
gtcactatttgtaaccctccattccacagctctcttgaagaggctgaaaagggctcacaa
cgtaaactggataatctagcggcgaaccgtgctaagaaagcaggtcagtcgttcaagcca
gaaacgaataagaagccagttaagttagataaatcaactaagcacgataaaccaacgcta
aactttggtggtcaaaaagccgagctttggtgcccgggtggcgaagccgctttcattatg
aaaatggcaagagagagccagctttttgctactcaagttttgtggtttacgacattgatt
tctaagaaagacaacgtcgatatggttcgttcagaactgggcaagttgcgagcgaaacaa
gtaaaagtcgtcgagatgtcacaaggccagaaggtaagtcgctttatcgcatggaccttt
atggatgatgagcaaagacaagagtggattgctcttaaatag
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