Vibrio crassostreae: IS519_03440
Help
Entry
IS519_03440 CDS
T08776
Name
(GenBank) response regulator
KO
K10916
two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:
2.7.13.3
3.1.3.-]
Organism
vcra
Vibrio crassostreae
Pathway
vcra02020
Two-component system
vcra02024
Quorum sensing
vcra05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IS519_03440
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IS519_03440
05111 Biofilm formation - Vibrio cholerae
IS519_03440
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
vcra01001
]
IS519_03440
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vcra02022
]
IS519_03440
Enzymes [BR:
vcra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
IS519_03440
Protein kinases [BR:
vcra01001
]
Histidine kinases
Lux family [OT]
IS519_03440
Two-component system [BR:
vcra02022
]
Lux family
LuxQN/CqsS-LuxU-LuxO (quorum sensing)
IS519_03440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
HATPase_c
HisKA
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
UPR30353
LinkDB
All DBs
Position
1:complement(770571..772619)
Genome browser
AA seq
682 aa
AA seq
DB search
MNAIRKVYQYAEPNLTLVGWMGFVGFPIYYIVWEFLFPQPYENLALRLFCSVLFFGIIFR
NRVPFEWRKYLPAYYQVAVTICLPGFFFYMLLMNNWSNVWVMSFMSAIFLHILLVHVTRV
MFAQTFAGIGIATLCAWIAQGFYLELTMDWTHVPIFLFIYLFGNLFYFRNQVEHENKVSL
AKSFGAGIAHEMRNPLSGLLTSIDVMQSILPNPKSGVQKGQYALSNEEVIQLREVGDEAM
EIIHSGNETIDLLLTSIDENRVSRSTFKKHSAQAVVEDAIDSFNYKRTADKSAISLDVQS
NFEFLGSDTLLKYVMYNLFKNAFHHRSPEDFHIHVTMFSDEVTNQIMVTDNGSGISSDII
RRIFQDFYTTGQSGNYGLGLPFCKKVMRSFGGEIKCQSEVEQWTQFTMTFPSLASNTVKE
IKSELTKLKTVLMVSDQKILTSKMTEISRFMGFELAVLDVASALKNKEYQFEFDLIFVDM
ESLDLRANCFDRIESLLSFTEARIIYLYERHPIKHVRNISFEPIWVETQVWLLNTKATID
RLLFDSNYVMTSVAVKPLEATTKRTIMVVDDNESLRRFTAMLLEKQGFDVVQKEDGQQAL
DALDTDDIDLILMDIEMPIMDGVEASRRIRSADKEYSSVPIIAHTGDSSPVTLEKMESSG
MSDFIVKPADKNRLFDKIAHWI
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgattcgtaaagtttaccagtacgcagaaccaaaccttactctcgtaggttgg
atgggctttgtcggctttccaatttactacattgtgtgggagtttttgtttccgcaaccc
tacgaaaacttagcgcttcgcctgttttgctcggtattgttctttggcattatatttcgt
aatcgtgtcccatttgaatggcgaaaataccttccggcttattatcaagttgctgtaact
atctgtttgccaggtttctttttctacatgctgctaatgaataattggtccaacgtttgg
gttatgtcattcatgtcggctattttcctccatattttattggtgcacgtgacgagagtg
atgtttgcacaaacctttgccggtattgggattgctacgttgtgtgcttggattgcacaa
ggcttctacctcgaactcacaatggattggacgcatgtgccaatctttttgtttatctac
ttattcggcaacttgttctacttccgcaatcaggtggaacatgaaaacaaggtgtcattg
gcgaagtcttttggtgcgggtattgcccacgagatgcgaaaccctctaagcggattactt
acctctattgatgttatgcagtctatattgcctaaccctaaaagtggcgttcaaaaaggg
caatatgcgttaagcaatgaagaagtgattcagttgcgtgaagtgggcgatgaagcgatg
gagatcattcattccggcaacgaaacgattgatctgttactgacttcaattgatgaaaac
cgcgtctctcgctctacgtttaagaagcattcagcgcaagcggtggttgaggatgcgata
gacagcttcaattacaaacgtactgctgataagtcagcaatctccttggatgtgcagagt
aactttgagttcttgggcagcgacaccttgctgaaatacgtcatgtataacctgttcaag
aatgcgttccatcatcgtagccctgaagatttccatattcatgtcaccatgttcagtgat
gaagtgacgaaccaaattatggtgacggataacgggtctggtatttcgagcgatatcatt
cgtcgtattttccaagatttttacaccacaggccagtcgggtaattacgggctgggttta
ccattttgtaagaaggtgatgcgttcgtttggtggtgagattaaatgccagtctgaagtg
gaacaatggacgcagtttacgatgacgttcccatctttggcttcaaatacagtgaaagag
atcaagagtgagctcactaagctgaagaccgtattaatggtgagcgaccagaagattctg
accagtaaaatgaccgagatatcgcgttttatgggctttgaacttgccgtcttagatgtc
gcatctgcgcttaagaacaaggagtatcagttcgaattcgatctgatctttgttgatatg
gagagcttggatttaagagccaattgcttcgataggattgaatcgttactttcgtttact
gaggcgcgaatcatttacttgtatgagcgtcatcctatcaagcatgtacgtaacatctct
ttcgagcctatttgggtggaaacacaagtctggctactgaatactaaagcgaccattgac
cgtttactgtttgactccaactacgtgatgacatcggttgctgtaaaaccgctagaggcc
accactaaacgtacgattatggtggtcgatgacaatgaatctctacgccgatttacggca
atgttattggaaaaacagggctttgatgttgtgcagaaagaagacggacaacaagcctta
gatgcgcttgataccgacgacatcgacttgatcctaatggatattgaaatgccaatcatg
gacggtgttgaagcttctcgccgaattcgaagtgccgacaaagaatactcttcggtgccg
attattgctcacacgggtgacagttctcccgttaccttggaaaagatggaatcgtcaggc
atgtcggactttattgttaaacctgccgacaaaaaccgactgttcgataaaattgctcac
tggatttag
DBGET
integrated database retrieval system
