Vibrio crassostreae: IS519_04850
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Entry
IS519_04850 CDS
T08776
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
vcra
Vibrio crassostreae
Pathway
vcra00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
IS519_04850 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vcra01007
]
IS519_04850 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcra03016
]
IS519_04850 (serS)
Enzymes [BR:
vcra01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
IS519_04850 (serS)
Amino acid related enzymes [BR:
vcra01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
IS519_04850 (serS)
Transfer RNA biogenesis [BR:
vcra03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
IS519_04850 (serS)
Prokaryotic type
IS519_04850 (serS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DUF2203
ERM_helical
PCRF
FapA
YscO-like
Motif
Other DBs
NCBI-ProteinID:
UPR30623
LinkDB
All DBs
Position
1:complement(1097907..1099214)
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AA seq
435 aa
AA seq
DB search
MLDSKLLRAELDETAAKLARRGFTLDVETIRELEEKRKSLQMKTEELQALRNSRSKSIGQ
AKAKGDHEEAERILAEVGNLGAELDQAKVALADLQSELETITMSIPNLPDAEVPDGKDED
DNVEVSRWGQPKTYDFEVKDHVDLGEMSGGLDFASAVKISGSRFIVMKGKFARLHRAIAQ
FMLDLHTDEHGYTEMYVPYLVNHDSLYGTGQLPKFGEDLFHTSPLTEQVSDVPLKTLSLI
PTAEVPVTNMVRDTITDEAELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI
TKPEDSMAALEELTGHAEKVLQLLELPYRKVILCTGDMGFGSAKTYDLEVWVPAQETYRE
ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENNQEADGRIAI
PAVLQPYMGGVTHIG
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgctggattctaaattacttcgagctgagctggatgaaacagcggcaaaattagcacgt
cgaggcttcacccttgatgtagagacaattcgtgaacttgaagaaaaacgtaagtccctt
cagatgaaaactgaagagctacaagcgttacgtaactctcgatcgaagtccattggtcaa
gcgaaagcaaaaggcgaccatgaagaagctgagcgtatccttgcagaagtaggcaactta
ggcgcagaactagaccaagctaaagtagcattggctgaccttcaatctgagctagaaacg
atcacaatgtctattcctaacctacctgatgcagaagtgccagatggtaaagatgaagac
gataacgtagaagtttctcgttggggtcaacctaagacttacgactttgaagtgaaagat
cacgtcgatcttggcgaaatgtctggcggtcttgattttgctagcgcagttaaaatctct
ggttctcgtttcatcgtgatgaaaggcaaatttgcacgtctacaccgtgctattgctcag
ttcatgctggaccttcacactgatgagcacggctacacagaaatgtacgtaccgtaccta
gtgaaccacgatagcctttacggtactggtcaacttcctaagttcggcgaagacttgttc
cacacaagcccgctaactgagcaagtaagtgacgtacctcttaagactctatcgcttatc
cctactgcggaagtaccggtaacgaacatggttcgtgacactattactgatgaagctgaa
ctgccacttaagatgacagctcacacgccatgtttccgttctgaagcgggttcttacggt
cgtgacactcgtggtcttatccgtatgcaccaattcgacaaagttgaattagtacaaatc
actaagccagaagactcaatggcagcgcttgaagagctaacaggtcatgctgagaaagta
cttcaacttctagagcttccttaccgtaaagtgattctatgtacaggtgacatgggcttc
ggttctgcgaaaacttacgacttagaagtatgggttccagcacaagagacttaccgtgaa
atctcttcttgttcaaacatgtgggatttccaagcgcgtcgtatgcaagctcgtttccgt
cgtaaaggcgagaaaaaacctgaacttgtacacacactaaacggttctggtcttgctgtt
ggtcgtactatggttgctatccttgagaacaaccaagaagctgatggccgtattgctatc
ccagcagtacttcagccatacatgggcggcgtaacgcacatcggttaa
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