Vibrio crassostreae: IS519_06490
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Entry
IS519_06490 CDS
T08776
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
vcra
Vibrio crassostreae
Pathway
vcra00541
Biosynthesis of various nucleotide sugars
vcra01100
Metabolic pathways
vcra01250
Biosynthesis of nucleotide sugars
Module
vcra_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
IS519_06490 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vcra01005
]
IS519_06490 (kdsA)
Enzymes [BR:
vcra01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
IS519_06490 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
vcra01005
]
Lipid A
IS519_06490 (kdsA)
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
UPR30933
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All DBs
Position
1:complement(1455257..1456111)
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AA seq
284 aa
AA seq
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MMEQKTVHIGDMPIANDKPFTLFAGMNVLESRDLAMQICEHYVKVTEKLGIPYVFKASFD
KANRSSVHSYRGPGMEEGLKIFQELKDTFGVKIITDIHTEAQAQPVADVVDVIQLPAFLA
RQTDLVEAMAKTGAVINVKKPQFMSPNQVGNIVDKFAECGNDNIILCERGACMGYDNLVV
DMLGFGVMKKSSNGSPIIFDVTHSLQMRDPSGAASGGRREQTVELAKAGLATGIAGLFIE
AHPNPDQARCDGPSALPLDKLEPFLKQMKALDDLIKGFEHIDIK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgatggaacagaaaacagttcacattggcgatatgccaattgctaacgacaagccattt
acgctatttgcaggcatgaacgttcttgaatctcgcgatcttgctatgcagatctgtgag
cactatgtaaaagtaaccgagaagctgggcatcccttacgtatttaaggcgtcttttgat
aaagcgaaccgcagctcagttcattcataccgtggtccaggtatggaagaaggtcttaaa
atcttccaagagctgaaagacactttcggcgtgaagatcattactgacatccatacagaa
gctcaagctcagcctgttgcggatgtggttgatgtaatccaactacctgcattcctagct
cgtcaaactgaccttgttgaagcaatggctaagactggcgcagtaatcaacgtgaagaag
cctcagttcatgagcccgaaccaagttggcaacatcgttgataagttcgctgagtgcggc
aacgacaacatcatcctatgtgagcgtggcgcttgcatgggttacgacaaccttgttgtg
gatatgcttggctttggcgtaatgaagaagtcttcaaacggtagcccaatcatcttcgac
gtgacgcactctctacaaatgcgtgacccatcaggtgcagcatctggcggtcgtcgtgag
caaacggttgaactagcgaaagctggcctggcgacaggtattgcgggtctattcattgaa
gctcacccgaacccagaccaagctcgttgtgatggcccatctgcgctacctctagacaaa
ctagagccgttcttgaagcagatgaaagcacttgatgaccttatcaaaggctttgagcac
atcgatattaaataa
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