Vibrio crassostreae: IS519_06705
Help
Entry
IS519_06705 CDS
T08776
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
vcra
Vibrio crassostreae
Pathway
vcra00550
Peptidoglycan biosynthesis
vcra01100
Metabolic pathways
vcra01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IS519_06705 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IS519_06705 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vcra01011
]
IS519_06705 (mrdA)
Enzymes [BR:
vcra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
IS519_06705 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
vcra01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
IS519_06705 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
SURF1
Motif
Other DBs
NCBI-ProteinID:
UPR30957
LinkDB
All DBs
Position
1:1482834..1484726
Genome browser
AA seq
630 aa
AA seq
DB search
MLRKRSQIRDYKAEARLFTNRAFVAFAGIIVMISMLVVNLYNIQVNQYQDYKTRSNDNRI
KVVPIAPNRGLIYDRNGVLLAENRPVFNLEITPEKIKDMDDTLVRLQELIEIPPERIERF
DRDRRNSRRFKSVPILNQLTEEQVAIFSVNQHKFPGVEVTGTLKRFYPYGDVLTHVIGYV
SRINDRDMQRLVREEKDANYQATRDIGKLGIERYYEDMLHGTAGYQEVEVNSRGRVIRTL
KFVPSVPGKDIVLNLDIKLQLYVHKLLDGRRGSAIVLDPKDNGVLAMVSSPSYDPNAFVH
GISSKGYNALLQDKDRPLVNRATLGIYPPASTIKPFIAVAALQEGVITPNTTRNDPGYWK
IPNSKTRPFRDWLRWGHGVVDIEKAIEESVDTFFYQIAYDLGIDRISKWMMMFGFGDYTG
IDIYEESKANMPTRDWKMARHRVPWYQGDTIPVGIGQGYWTATPMQIAKATSVLVNEGEV
TAPHLLRSTIDNGRPFDEQIMSDIETYPPLTGVKKKYWDIAQEGMRLANHGKKGTARRSF
QKMSYQTAGKSGTAQVFGLKEDEEYNADEIAEHLRDHALFTGYAPFEDPEAVVTIVLENA
GGGSSNGGPVVRRILDHIILAEDYQSEPIK
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgttacgtaaacgtagccaaatccgtgattacaaagcagaagcacgactatttactaat
cgtgcttttgttgcgtttgcggggatcatagtcatgatatcgatgttggttgttaacctg
tacaacattcaggtcaatcaatatcaagactataaaacccgctctaacgataaccgcatc
aaggtcgttccaatcgcccccaaccgtggtttgatttacgatcgtaatggtgtgcttctt
gcagaaaatcgcccggttttcaacctagaaatcacaccagaaaaaatcaaagatatggat
gacacgctcgtccgtctacaagaattaatcgagatcccgccagagcgtattgaacgattt
gatcgtgatcgtcgcaattcacgacgcttcaagtcagtacctatcctgaatcagcttacc
gaagaacaagttgcgatcttctctgtaaatcagcataagttcccaggtgttgaagttaca
ggtacgctaaaacgtttctacccttatggtgatgtgttaactcacgtgattggctacgta
tcgcgcatcaatgaccgtgatatgcagcgcttggttcgcgaagagaaagacgccaattac
caagccactcgcgacatcggtaaacttgggattgagcgctactacgaagacatgcttcac
ggtaccgcgggctatcaagaagtcgaagttaacagccgtggacgagtgatccgtactcta
aaatttgtaccgtcggttccgggtaaagatatcgtgctcaacttggatatcaagctacaa
ctatacgtacataagttacttgatggccgccgtggttcagctatcgttctcgacccgaaa
gacaatggcgtgttagcaatggtatctagcccaagctacgacccaaatgcattcgtacat
ggtatttcgtctaaaggttataacgccctacttcaagacaaagaccgccctttggttaac
cgtgcaacgctaggtatttatcctccagcatcgacgatcaagccattcattgctgttgca
gctctgcaagaaggtgtgattacacccaacacaacgcgtaatgacccaggttattggaag
atccctaattcaaaaacaagaccattccgtgactggttgcgttggggacacggggtcgtt
gatatcgagaaagcgattgaagagtcagtggatactttcttttaccaaattgcttatgat
ctcggcattgatcgcatatccaaatggatgatgatgttcggctttggtgattatactggc
atcgatatttatgaagaaagcaaagccaatatgccaactcgtgattggaagatggccaga
caccgtgtgccttggtaccaaggtgacaccatcccagttggtattggccaaggctactgg
actgcaacaccaatgcagattgcaaaagccacatcagttttggtcaatgaaggtgaagta
accgcacctcacctacttcgttcaaccattgataacggtcgtccattcgatgagcaaatc
atgtcggacattgaaacttacccaccgctaaccggggttaagaagaagtattgggatatc
gctcaggaaggtatgaggctggctaaccacggtaagaaaggtacggcaagacgttcattc
cagaagatgtcttaccaaaccgcgggtaaatcgggtaccgcgcaggtattcggcttaaaa
gaagatgaagagtacaacgcggatgaaatcgcagagcacttacgcgatcacgccctcttt
acgggttacgcgccttttgaagatcctgaagccgtcgtaactatcgttctagagaacgca
ggtggcggttcttctaacggcggcccagtagtaagaaggattttagaccatattatcctt
gcagaagattatcaaagtgagccaattaaataa
DBGET
integrated database retrieval system
