Vibrio crassostreae: IS519_06860
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Entry
IS519_06860 CDS
T08776
Symbol
tcdA
Name
(GenBank) tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
vcra
Vibrio crassostreae
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcra03016
]
IS519_06860 (tcdA)
Transfer RNA biogenesis [BR:
vcra03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
IS519_06860 (tcdA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ThiF
Sacchrp_dh_NADP
NAD_binding_7
UDPG_MGDP_dh_N
AlaDh_PNT_C
3HCDH_N
Pyr_redox_2
DAO
Cons_hypoth95
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UPR30987
LinkDB
All DBs
Position
1:complement(1516262..1517071)
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AA seq
269 aa
AA seq
DB search
MRELTTPASENYDQRFGGTRRLYGNSEVDILRGAHVCVIGIGGVGSWAVEALARTGLGEL
TLIDMDDVCVTNINRQIHAMSGTVGKSKIEVMAERVKLINPECKVNLVDDFIGPDNQAEY
LSKEFDFVLDAIDSMKAKASLLAYCRSNKIKVITTGGAGGQIDPTQIKVADLTKTIQDPL
AKKLKDTLRRHHNFPKNPARKFGIDCVFSTEQLKYPQADGSVCAAKATAEGPKRMDCATG
FGAATVVTATFGFVAVSRIVEKLIQKHAK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaattgaccactccagcttcagaaaactatgaccaacgatttggtggcacccgt
cgcctatatggcaatagtgaagtcgacatacttagaggagcacacgtgtgtgtgatcggt
attggtggtgtcggttcatgggcggttgaagcgcttgctcgtactggtttaggtgagctg
actttgatcgatatggatgatgtgtgtgtgaccaacatcaaccgtcagatccacgcaatg
tcgggtaccgttggtaaaagcaaaattgaagtgatggcagagcgcgttaagctgattaac
cctgagtgtaaagttaacctggttgacgacttcatcggcccagacaatcaggctgaatac
ctatcgaaagagttcgactttgtgttggatgcgattgatagcatgaaagctaaggcttca
ctgttggcatattgtcgtagcaacaaaattaaggtgatcaccaccggtggtgcgggtggt
caaatcgatcccactcaaatcaaagtggctgatctgactaagacgattcaagatccgcta
gcgaagaagctaaaagatacccttcgtcgtcatcataacttccctaagaatccagcacgt
aagtttggtatcgattgtgtgttctcaactgaacagctgaaataccctcaagctgacggc
agtgtatgtgctgcgaaagcgacagcagaaggtccaaaacgcatggattgtgcgacgggt
tttggtgcggcaacggttgtaacagcgacgtttggctttgtggctgtttcacgtattgta
gaaaagctgattcaaaagcacgctaagtaa
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