Vibrio crassostreae: IS519_07890
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Entry
IS519_07890 CDS
T08776
Symbol
nfo
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
vcra
Vibrio crassostreae
Pathway
vcra03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IS519_07890 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcra03400
]
IS519_07890 (nfo)
Enzymes [BR:
vcra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
IS519_07890 (nfo)
DNA repair and recombination proteins [BR:
vcra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
IS519_07890 (nfo)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
UPR31176
LinkDB
All DBs
Position
1:complement(1764321..1765229)
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AA seq
302 aa
AA seq
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MTNNNSSSKPETNIKFIGAHVSAAGGVDQAPMRAREIGANAFALFTKNQRQWAAKPLEAK
TISAFKANCKMLGFGAEHILPHDSYLINLGAPEEEKLEKSRAAFIDEMERCNQLGLTLLN
FHPGSHLKKISESECLAKIAESINLAHQAVPDVIAVIENTSGQGTNLGWKFEHLAEIIEQ
VEDKSRVGVCLDTCHTFTAGYDLRTKEACEHTFAEFDRIVGMHYLRAMHINDSKAEFASR
VDRHHSLGKGEIGWDCFEYIASDSRFNGIPLILETIDSTIWKKEIQQLRMFHRSATLASE
QA
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacaataattcatcctcaaaaccggaaacaaatattaagtttattggcgctcat
gtgtcggctgctggtggtgttgatcaggcgcctatgcgtgcacgtgaaataggtgccaat
gcgtttgcactgtttaccaagaaccaaagacagtgggcggcaaaaccgctagaagcgaaa
accattagtgcctttaaagccaattgcaaaatgttgggcttcggtgctgagcacattctt
cctcatgactcctaccttattaacctaggagcaccagaagaagagaagttagagaaatca
cgcgcggcttttattgatgaaatggagcgttgtaatcaacttggattaacgctcttgaat
tttcatcctgggagtcatttaaagaaaatctcagaaagcgaatgtttggcgaagatcgct
gaatccatcaacctagctcatcaagcggtacctgacgtaatcgcagtgatcgagaatacg
tctgggcagggcactaacctgggttggaagtttgaacatctagcagagattatcgaacag
gtagaagataagtcgcgtgttggagtgtgcttagacacctgccatacgtttactgctggc
tatgacttacgtacaaaagaggcgtgtgagcatacttttgctgagttcgaccgcatcgtg
ggtatgcactatctaagagcaatgcacatcaatgattcaaaagctgagttcgcgagccga
gtcgatcgacaccattctttaggaaaaggcgaaattggctgggattgttttgagtatatt
gcctctgattctcgctttaatggtatccctcttatcttggaaaccattgattcgacgatc
tggaaaaaggaaattcaacaacttagaatgtttcatcgctcagcaacgctagcgagcgaa
caagcgtaa
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