Vibrio crassostreae: IS519_08585
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Entry
IS519_08585 CDS
T08776
Symbol
rng
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
vcra
Vibrio crassostreae
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcra03019
]
IS519_08585 (rng)
03009 Ribosome biogenesis [BR:
vcra03009
]
IS519_08585 (rng)
Messenger RNA biogenesis [BR:
vcra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
IS519_08585 (rng)
Ribosome biogenesis [BR:
vcra03009
]
Prokaryotic type
rRNA processing factors
IS519_08585 (rng)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
UPR28305
LinkDB
All DBs
Position
1:complement(1939163..1940632)
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AA seq
489 aa
AA seq
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MSAELLLNVTPSETRVAMIEGGALQEIHVERDARRGIVGNIYKGRVSRVLPGMQAAFVDI
GLEKAAFLHASDIVPHTECVAENEKKQFQVRDISELVRQGQDIVVQVVKDPLGTKGARLT
TDITLPSRYLVFMPGASHVGVSQRIDSESERNRLKKVVSRYCDEHGGFIIRTAAEGADSN
ELAQDAAFLKRLWLKVLERRGKHKARTRLYGELCLSQRILRDFVGTELSKIQVDSRLEYE
NLKEFTSEYVPELTDKLELYEGDKPIFDMYDTENEIQRSLDRKVELKSGGYLIIDQTEAM
TTVDINTGAFVGRRNLEETIFNTNVEATQAIARQLRLRNLGGIIIIDFIDMLSEEHRKRV
LTSLEAALDKDRVKTNINGFTQLGLVEMTRKRTRESIEHILCSSCPACEGRGSVKTVETV
CYEILREITRVNRAYDADKFVVYAAAAVAEALEGDESHALAELEVFIGKQVKIQAEPLYI
QEQFDVVMM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgaattgttgctgaacgtgaccccgagtgaaactcgtgtggccatgattgaa
gggggggctcttcaagaaatccatgtcgaacgagatgctcgacgcggtatcgtaggaaat
atctataaaggacgtgtaagccgtgttcttccgggaatgcaggcggcttttgtggatata
ggccttgagaaagcagcttttttacacgcctctgatattgtcccacacactgaatgtgtc
gctgaaaacgaaaagaagcaatttcaggttcgtgatatttcagagcttgttcgtcaaggg
caagacattgtggtgcaagtggtcaaagaccctctaggtactaaaggtgcccgcttaacc
actgacatcactctaccgtctcgttatctggtattcatgccgggcgcaagtcatgttggt
gtatctcaacgtatcgacagcgaatctgaacgtaaccgccttaaaaaagtcgtgtctcgt
tactgtgacgaacatggtggcttcatcattcgcactgccgcagaaggtgcagattcaaat
gagttggcacaagatgccgcattcttgaagcgattatggctaaaagtactagagcgtcgt
ggtaagcacaaagcgcgtactcgtttgtacggcgagctttgcttaagccaacgtatctta
cgtgactttgtcggtactgagctgagcaagattcaggtcgattctcgtctagaatatgaa
aacctgaaagagtttacctctgaatatgtgcctgagctgacagacaagcttgagctgtat
gaaggtgataagcctatctttgatatgtacgataccgagaacgaaattcagcgttcattg
gatcgtaaagtcgaattaaagtctggtggatatctgattatcgaccaaacagaagcgatg
accacggttgatatcaacaccggtgcgtttgtcggtcgtcgtaatctagaagagacgatt
ttcaataccaacgttgaagcgactcaagcaattgctcgccagctgcgtttacgtaaccta
ggtggcatcatcattatcgactttattgatatgttgtctgaggaacatcgtaagcgagta
ctaacttctttagaggctgcgctcgacaaagaccgtgtgaaaaccaatattaatggcttc
acgcagcttggtttggttgagatgacgcgtaagcgaactcgcgaaagtattgagcatatt
ctgtgttctagttgccctgcttgtgaaggtcgtggcagtgtgaagacagttgaaaccgtt
tgttatgaaatacttcgagaaatcacgcgagtgaatcgtgcgtacgacgccgataaattt
gtggtctatgcggcagcagccgtggccgaggcgttagagggcgatgaatctcatgcgctt
gcggagcttgaagtctttattggtaagcaagttaaaatccaggctgagcctctgtacata
caagagcagtttgatgttgttatgatgtaa
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