KEGG   Vibrio crassostreae: IS519_09895
Entry
IS519_09895       CDS       T08776                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
vcra  Vibrio crassostreae
Pathway
vcra03030  DNA replication
vcra03410  Base excision repair
vcra03420  Nucleotide excision repair
vcra03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vcra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    IS519_09895 (polA)
   03410 Base excision repair
    IS519_09895 (polA)
   03420 Nucleotide excision repair
    IS519_09895 (polA)
   03440 Homologous recombination
    IS519_09895 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vcra03032]
    IS519_09895 (polA)
   03400 DNA repair and recombination proteins [BR:vcra03400]
    IS519_09895 (polA)
Enzymes [BR:vcra01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     IS519_09895 (polA)
DNA replication proteins [BR:vcra03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     IS519_09895 (polA)
DNA repair and recombination proteins [BR:vcra03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     IS519_09895 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     IS519_09895 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH_5 WHD_BrxR Obc1_cap
Other DBs
NCBI-ProteinID: UPR28526
LinkDB
Position
1:complement(2220128..2222926)
AA seq 932 aa
MARIPDNPLILIDGSSYLYRAFHAYPGTMSNGDIPTNAVYGVVNMLRSMMRQFASDRIAV
IFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLISIPGVEADDVIGT
LASQASAMGMPVLISTGDKDMAQLVDDNVTLINTMTNVVMDREGVIEKFGIPPELIIDYL
ALMGDKVDNIPGVPGVGDKTATALLQGIGSIEKLYQNLDDIAALGFRGSKTMAKKLIDNK
DNAEMSYELATIKLDVELEETPESLVKVQPNTDELIKLYGQLVFKSWLNELLEGGSGVVE
ADEKSGAVRSNTASTTSTVEMNTSAVTIDRSNYETILDEASFNVWLEKLKAAEVFAFDTE
TDSLDYMVANLVGLSFATEEGVAAYVPVAHDYLDAPQQLDRDWVLEQLKPILEDDAQAKV
GQNLKYDMSVLARYGIEMKGIKHDTMLASYVFNSVGGKHDMDSLALRFLQHSCISFEQIA
GKGKKQLTFNQIELGEASPYAAEDADVTLRLHNRLMENIEQDEKLKAIYEEIEVPLIPVM
SRIERTGVFIDDMLLGAQSQEIAVRLDELEQKAYEIAEQEFNMNSPKQLQAILFEKMGLP
VIKKTPSGAPSTNEEVLQELALDYPLPKLIIEYRGLAKLKSTYTDKLPKMINAETGRVHT
SYHQAVTATGRLSSTDPNLQNIPIRNEEGRRIRQAFVAQHGWKILAVDYSQIELRIMAHL
SGDKALLEAFQQGKDIHAATAAEIIGVDIESVTTEQRRRAKAVNFGLIYGMSAFGLAKQL
GIPRGEAQHYMDTYFERYPGVMQYMEDTRSAASEQGFVETIYGRRLHLPEIQSRNGMRRK
AAERAAINAPMQGTAADIIKKAMLLVDEWIQAEGDGRVKLLMQVHDELVFEVEESSLAEI
ESKVQELMESAAELEVPLVAEAGHGDNWDQAH
NT seq 2799 nt   +upstreamnt  +downstreamnt
atggctcgtattcctgataatccattgattctgatcgatggctcttcttacctatatcgc
gcattccatgcttaccctggcacaatgagcaatggtgatatcccaactaacgctgtttac
ggtgtagttaacatgctgcgcagcatgatgcgtcaatttgcttctgatcgtattgcggta
atttttgatgcgaaaggaaagacgttccgtgatgacatgtacccagagtacaaggcaaat
cgtccacctatgcctgatgatcttcgttgccagattgagcctttgcacaatgtgattcgt
gcaatgggtttgccacttatctctattcccggagttgaagcggatgacgtgatcggtacg
cttgcttctcaagcttctgcgatgggtatgcctgtgcttattagtactggcgataaagat
atggcgcagcttgtcgatgacaacgttactctgatcaataccatgaccaacgtggtaatg
gatcgtgaaggcgtgattgagaagtttggcattccgccagagcttattatcgactacctt
gcgctgatgggcgataaagtcgataacatcccaggagttccgggtgtcggtgacaagaca
gcgactgctctgctgcaaggcattggtagcatcgaaaagctgtatcaaaacctggatgat
attgccgctcttggcttccgtggttcaaaaaccatggctaagaagctgattgataataaa
gacaacgctgagatgtcttatgagcttgcaacgatcaaactggacgtcgagttagaagag
acacctgagtcgcttgtaaaagtacaaccaaacacggatgagctgattaagctatatggt
caactggtcttcaagtcttggttgaacgagctacttgaaggtggcagtggtgtggttgag
gcggatgaaaagtcgggcgcagtgcgcagcaatacggcatcaaccacttctaccgtagaa
atgaacacctctgccgtgacgattgatcgcagcaactacgaaaccatcctcgatgaagcg
tcattcaatgtttggctagagaaactgaaagcggctgaagtgtttgctttcgatactgag
acagacagcctagattacatggtggcgaacctcgttggcctgtcattcgcgactgaagaa
ggcgttgccgcttacgtgccggttgcccatgattacctagatgcacctcagcagctggat
cgcgattgggtacttgaacagcttaagccgattcttgaagatgacgcacaagcgaaagtc
ggtcagaaccttaagtacgatatgagcgtgttagctcgctacggtatcgagatgaaaggc
atcaaacacgacaccatgttggcgtcttacgttttcaatagcgtaggtggcaagcatgat
atggacagcctagcgctgcgtttccttcagcatagctgcatctcatttgagcaaatcgca
ggtaaaggtaagaaacagcttactttcaaccagattgagctgggtgaagcgtcgccatac
gcagcagaagatgctgacgtgacactacgtcttcataaccgtttgatggaaaacattgaa
caagatgaaaagctaaaagccatctatgaagaaattgaagtaccactgatacctgtgatg
tctcgcattgaacgcaccggcgtattcatcgatgacatgttgctaggcgctcaatcgcaa
gagattgcggttcgtttggatgagctagaacagaaagcctacgagattgcagagcaagag
ttcaacatgaactcgccaaaacagctgcaagcgatcctgtttgagaaaatgggtctgcca
gttattaagaaaacgccatcaggtgcaccttcaaccaacgaagaagtgctgcaagagctg
gctcttgattacccgctacctaagctgatcattgagtatcgtggccttgcgaaactaaag
tctacctacacagataaactaccgaagatgatcaacgctgaaacgggtcgtgttcacacg
tcttatcaccaagcggtgacagcaacgggtcgtttgtcttcaacagatccaaacctacag
aacatcccaattcgtaatgaagaaggccgtcgtatccgccaagcattcgttgcacaacat
ggctggaagattctagcggtcgattactctcaaattgaattgcgtatcatggcgcacctt
tcgggtgataaagcgcttctggaagcattccaacaaggcaaagatatccacgcggcaacg
gctgctgagatcattggggttgatattgagagtgtgaccactgaacaacgtcgtcgtgct
aaagctgttaacttcggccttatctacggtatgagtgcctttggcttggctaagcaactg
ggtattcctcgtggtgaagcacagcattacatggatacttacttcgagcgttaccctggc
gtaatgcagtatatggaagacacgcgcagtgcagcttcagagcaaggcttcgttgaaacc
atttacggtcgtcgtctgcaccttcctgagattcaatctcgtaatggcatgcgtcgtaag
gcagctgaacgcgctgcgatcaacgcgccaatgcaaggtacagcggcagacatcattaag
aaagcgatgctgttggtggatgagtggattcaagcggaaggcgatggtcgagttaagtta
ttgatgcaagtacacgatgaattggtatttgaagtggaagagtcatctttagccgaaatt
gaaagtaaagtacaagaattgatggaatccgctgcagagctagaagtaccgcttgtcgcg
gaagctggccacggtgacaactgggatcaagcccactaa

DBGET integrated database retrieval system