Vibrio crassostreae: IS519_10565
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Entry
IS519_10565 CDS
T08776
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
vcra
Vibrio crassostreae
Pathway
vcra00071
Fatty acid degradation
vcra00280
Valine, leucine and isoleucine degradation
vcra00310
Lysine degradation
vcra00362
Benzoate degradation
vcra00380
Tryptophan metabolism
vcra00410
beta-Alanine metabolism
vcra00640
Propanoate metabolism
vcra00650
Butanoate metabolism
vcra00907
Pinene, camphor and geraniol degradation
vcra00930
Caprolactam degradation
vcra01100
Metabolic pathways
vcra01110
Biosynthesis of secondary metabolites
vcra01120
Microbial metabolism in diverse environments
vcra01200
Carbon metabolism
vcra01212
Fatty acid metabolism
Module
vcra_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
IS519_10565 (fadB)
00650 Butanoate metabolism
IS519_10565 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
IS519_10565 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
IS519_10565 (fadB)
00310 Lysine degradation
IS519_10565 (fadB)
00380 Tryptophan metabolism
IS519_10565 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
IS519_10565 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
IS519_10565 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
IS519_10565 (fadB)
00930 Caprolactam degradation
IS519_10565 (fadB)
Enzymes [BR:
vcra01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
IS519_10565 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
IS519_10565 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
IS519_10565 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
IS519_10565 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DUF5546
Motif
Other DBs
NCBI-ProteinID:
UPR28643
LinkDB
All DBs
Position
1:complement(2361168..2363339)
Genome browser
AA seq
723 aa
AA seq
DB search
MIYQANTLQVKELQDGIAELSFCAPASVNKLDLATLESLDKALDALNAHAGLRGLILTSN
KDAFIVGADITEFLGLFAKPEAELDEWLRFANSIFSKLEDLPVPTLSMMRGHALGGGCEC
VLATDFRIGDKTTSIGLPETKLGIMPGFGGCVRLPRVIGADSAMEIITQGKACRADEALK
VGLLDAIVETDQLLESAINTVSLAANEKLDWQLRRKQKTSALSLSKLEAMMSFTMAKGLV
AQKAGPHYPAPITSVIAIEEAARSDRDAALDIERKHFVKLAKSEEAKALVGLFLNDQYIK
GLAKQAGKSANKATERAAVLGAGIMGGGIAYQSALKGVPVMMKDIAQASLDLGMNEASKL
LNKRLSRGRLDGFKMAGILSSITPSLHYAGVEQSDVIVEAVVENPKVKAAVLSEVEGLVG
EDTVLTSNTSTIPINLLAKSLKRPENFCGMHFFNPVHRMPLVEIIRGEHTSEETINRVVA
YAAKMGKSPIVVNDCPGFFVNRVLFPYFGGFSMLLRDGADFTKIDKVMERKFGWPMGPAY
LLDVVGLDTAHHAQAVMAQGFPERMGKEGRDAIDALYVAEKYGQKNGSGFYTYSVDKRGR
PKKTFSEDILPILADVCQQPQDFDDQTIIQRVMIPMINEVVLCLEEGIIATPQEADMALV
YGLGFPPFRGGVFRYLDSVGIGNFVEMAKGYQDLGAMYQVPQLLLDMAAKGESFYDSQQA
SSL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaagctaacaccctacaggtaaaggaattacaagatggtattgcggaatta
agcttctgtgcaccagcctctgtaaacaaactcgaccttgctactttagaatcactagac
aaagcgttagatgctcttaatgctcacgcaggattacgtggtttaatcttaacttcaaac
aaagacgcgttcattgtaggcgcagacatcactgaatttctcggcctatttgctaagcca
gaagcagaacttgatgagtggttaagattcgcaaattcaatcttcagcaagctcgaagac
cttcctgtcccaactctttcaatgatgcgtggccatgcccttggcggcggctgtgaatgt
gtactcgctactgatttccgtatcggtgacaagaccaccagcattggcctacctgaaacc
aaacttggcatcatgcctggttttggtggttgtgtgcgcctgcctcgtgttatcggtgct
gacagcgcaatggaaattatcactcaaggcaaagcatgccgtgctgatgaagcgctaaaa
gttggcttgttagatgcgattgtagaaacagaccagctgctagagtcggcaatcaacacc
gtatctctggctgccaatgaaaaactagactggcagttacgccgcaaacagaaaacatca
gcattgtcgcttagcaaactagaagcgatgatgagctttaccatggctaagggcttagtc
gctcaaaaagccggacctcattatccagcgccaatcacttctgtgattgcaattgaagaa
gcggcacgaagcgatcgtgatgctgcactcgatatcgaacgtaagcacttcgtcaagcta
gcgaaatcagaagaagctaaagcactagtcggcttattcctaaatgaccaatacatcaaa
ggcctagcgaagcaagcgggtaagtctgcaaacaaagcaactgagcgtgcagccgtactc
ggcgcaggcatcatgggcggcggtattgcttaccaatcagcgttaaaaggcgtgcccgtg
atgatgaaagacatcgcacaggcgtctcttgatctcggtatgaacgaagcatctaagctt
ttgaataaacgcttatcacgcggtcgcctagatggattcaagatggcaggcattctttct
tctattactccaagtctgcattatgcaggtgttgaacaatcagatgtgattgtggaagcg
gttgtagaaaaccctaaagtaaaagcagcagtgctgagtgaagttgaaggtctcgtgggt
gaagacacagttcttacatcaaacacctcaacgattccgatcaacctgttagcgaaatct
ttgaagcgcccagaaaacttctgtggcatgcacttctttaacccagtgcatcgcatgcct
ttggttgagatcatccgtggcgagcatacttcagaagaaaccattaatcgcgtagtcgct
tacgcagcgaagatgggcaaatcccctatcgttgttaacgactgcccaggcttcttcgta
aaccgtgtacttttcccttactttggcggtttcagcatgttgctacgtgacggtgctgat
ttcactaagatcgataaagtgatggagcgtaagttcggttggccaatgggcccagcttac
ttgctagacgttgtgggtctagacacagcacaccacgcacaagctgtaatggcacaaggt
ttccctgagcgtatgggtaaagaaggtcgtgatgcgatcgacgcactttacgttgctgaa
aaatacggtcagaagaacggcagcggtttctacacatacagcgtagacaaacgcggtcgt
cctaagaagaccttctctgaagacattcttcctatcttggctgacgtatgccaacaaccg
caagactttgatgaccaaacaattatccagcgcgtgatgattccaatgatcaacgaagtg
gtgctttgtctagaagaaggcattatcgcgacaccgcaagaagcggatatggcactggtt
tacggtttaggcttccctccattcagaggcggcgtattccgctacttagacagtgtgggc
attggtaacttcgttgaaatggcgaaaggctaccaagacttaggtgcaatgtaccaagta
cctcagctattgcttgatatggcagcgaagggcgaaagcttttacgacagccaacaagcc
agttctctgtaa
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