KEGG   Vibrio crassostreae: IS519_10875
Entry
IS519_10875       CDS       T08776                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
vcra  Vibrio crassostreae
Pathway
vcra00300  Lysine biosynthesis
vcra00470  D-Amino acid metabolism
vcra01100  Metabolic pathways
vcra01110  Biosynthesis of secondary metabolites
vcra01120  Microbial metabolism in diverse environments
vcra01230  Biosynthesis of amino acids
Module
vcra_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:vcra00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    IS519_10875 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    IS519_10875 (dapF)
Enzymes [BR:vcra01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     IS519_10875 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: UPR28687
LinkDB
Position
1:2429695..2430525
AA seq 276 aa
MHFHFSKMHGLGNDFMVVDCITQNIFFSPDLIRRLADRHTGVGFDQLLVVEAPYDPETDF
HYRIFNADGSEVEQCGNGARCFARFVRMKGLTNKYSINVSTKKGKMVLKIEENDLITVNM
GIPEFEPGKIPFKAKQPEKTYILRTDVHTLFCGAVSMGNPHVVTVVDDVDTADVDTLGPL
LESHERFPERVNAGFMQVVNREEVRLRVYERGAGETQACGSGACGAVAVGITQGLLAENV
KVRLPGGDLHISWQGPGKPLFMTGPATHVFDGQLSC
NT seq 831 nt   +upstreamnt  +downstreamnt
atgcacttccacttttctaaaatgcatggtttgggcaatgatttcatggtcgtggactgc
attactcaaaatattttcttttctccagatttgatccgtcgtttggcggatcgtcacact
ggcgtgggctttgatcagctacttgtggttgaggctccctatgatccagaaactgatttc
cattaccgcatatttaatgcggatggcagtgaagtggagcagtgtggcaatggtgcacgt
tgttttgcacgattcgttcgcatgaaaggcttaacgaataagtacagcatcaacgtcagc
accaagaaaggtaaaatggttctcaagattgaagagaatgacttgatcaccgtgaacatg
ggcattcctgagttcgaacccggcaaaattccgttcaaggcaaagcagccagagaagacg
tatatcctaagaacggatgtacacaccttattctgtggtgcggtaagcatgggtaaccca
catgtggttaccgtggttgatgatgtcgacacggctgatgtggacaccttaggcccgctg
cttgaatcacacgaacgtttccctgagcgtgttaatgctggctttatgcaggtcgttaac
cgtgaagaagttcgtctacgtgtttatgagcgcggcgcgggtgaaactcaggcatgtggc
agcggagcgtgtggcgcagttgcagtgggtatcactcaaggtttactggctgagaatgtg
aaagttcgtctacctggcggtgacttacacattagctggcaaggcccgggtaaacctcta
tttatgaccggccctgcaacgcatgtgtttgatggtcaactttcttgttaa

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