Vibrio crassostreae: IS519_10995
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Entry
IS519_10995 CDS
T08776
Symbol
rsmD
Name
(GenBank) 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
vcra
Vibrio crassostreae
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcra03009
]
IS519_10995 (rsmD)
Enzymes [BR:
vcra01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
IS519_10995 (rsmD)
Ribosome biogenesis [BR:
vcra03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
IS519_10995 (rsmD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cons_hypoth95
MTS
Methyltransf_37
Methyltransf_31
MethyltransfD12
Methyltransf_25
Methyltransf_15
Methyltransf_4
Methyltr_RsmB-F
GidB
RrnaAD
TRM
TRM5-TYW2_MTfase
DNA_methylase
Methyltransf_12
SAM_MT
Spermine_synth
UPF0020
Motif
Other DBs
NCBI-ProteinID:
UPR28711
LinkDB
All DBs
Position
1:complement(2453817..2454419)
Genome browser
AA seq
200 aa
AA seq
DB search
MVRRRQQNTSQKKPSGGFVRIISGSWRGRKLPVHDLEGLRPTIDRVKETLFNWVAQDIPH
STCLDVFAGSGGLGFEAASRQAKMVTLLEMNQKAAKQLSDNAKELKADNINVVNTDAISF
LKKPGTPYDMVFLDPPFRQGLLAETVQLLESNGWLADNAIIYVETEKELKLEAMPENWEL
HRDKTTGQSSYRLFNRITEE
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggtaagacgtcgccagcaaaacacatcacaaaaaaagccatccggaggctttgttcga
attattagtggctcatggagaggtagaaagctgcctgttcatgatttagaaggattacgc
ccaaccattgaccgagtaaaagagacactctttaactgggtggctcaagatatcccacat
tcaacttgcttggatgtatttgccggttctggcggtctaggttttgaagcagcttctcgc
caagcaaaaatggtgacactgctcgaaatgaatcaaaaggcggctaaacagctttctgat
aacgcgaaagagctcaaggcagacaacattaatgtcgtgaatactgatgctatctctttc
cttaagaaaccgggcactccttacgatatggttttccttgatccaccatttcgtcaaggc
ttactggcagaaacagtacaactgcttgagagtaatggttggcttgcagacaatgccatc
atttacgtcgagacagagaaagaactgaaactcgaagctatgccagagaactgggaattg
catcgcgacaagaccaccggacagtcaagctaccgactgttcaatcgaatcactgaagaa
tag
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integrated database retrieval system
