KEGG   Vibrio crassostreae: IS519_11465
Entry
IS519_11465       CDS       T08776                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vcra  Vibrio crassostreae
Pathway
vcra03030  DNA replication
vcra03430  Mismatch repair
vcra03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vcra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    IS519_11465
   03430 Mismatch repair
    IS519_11465
   03440 Homologous recombination
    IS519_11465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vcra03032]
    IS519_11465
   03400 DNA repair and recombination proteins [BR:vcra03400]
    IS519_11465
Enzymes [BR:vcra01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     IS519_11465
DNA replication proteins [BR:vcra03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     IS519_11465
DNA repair and recombination proteins [BR:vcra03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     IS519_11465
SSDB
Motif
Pfam: RNase_T Rv2179c-like DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: UPR28782
LinkDB
Position
1:complement(2554071..2554703)
AA seq 210 aa
MNRLVRYYWHHKLKGSLYQPLFTTPTDHEYVSLDCETTSLDPNQAELVTIAATKIIGNRI
ITSQPFEVRLRAPQSLDCNSIKIHRIRHQDLKYGIEEKQALIELLNFIGNRPLVGYHIRY
DKKILDRACLKQLGFPLPNRLVEVSQLYQDKLERQLPNAYFDLSMDAICRQLDLPIPVNK
HDALQDAISAALIFVRLKHGDLPRFNSSYS
NT seq 633 nt   +upstreamnt  +downstreamnt
atgaataggttggttcgctattactggcatcacaagctcaaaggctcactctatcagcct
ctgtttactacacctactgatcatgaatatgtatcgctcgattgtgaaaccaccagccta
gaccccaatcaggcggaattagtcactattgccgcgaccaagatcatcggtaaccgaatc
attaccagtcaaccttttgaagtccgattgcgcgccccgcaatcgctcgattgcaattca
ataaaaatccaccgcattcgtcatcaagatctaaagtacggcatcgaagaaaaacaggct
ttaatcgagctactgaacttcattggaaatcgtcctttagtcggctaccacatccgctat
gacaaaaaaattctcgaccgcgcctgtttaaaacagcttggatttccactgcctaaccga
ttagtcgaagtgagccaactctatcaagacaaacttgaaagacagctgcccaatgcctat
tttgatctcagcatggatgccatctgtcgccagctcgatttacccatcccggtcaataaa
catgatgcattacaagacgctatctccgctgcgctgatctttgtgcgcctgaaacatggt
gacctgccccgtttcaactcttcttattcttaa

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