Vibrio crassostreae: IS519_11705
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Entry
IS519_11705 CDS
T08776
Name
(GenBank) PadR family transcriptional regulator
KO
K10917
PadR family transcriptional regulator, regulatory protein AphA
Organism
vcra
Vibrio crassostreae
Pathway
vcra02024
Quorum sensing
vcra05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IS519_11705
05111 Biofilm formation - Vibrio cholerae
IS519_11705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcra03000
]
IS519_11705
Transcription factors [BR:
vcra03000
]
Prokaryotic type
Helix-turn-helix
PadR family
IS519_11705
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Gene cluster
GFIT
Motif
Pfam:
Vir_act_alpha_C
PadR
HTH_34
Motif
Other DBs
NCBI-ProteinID:
UPR28828
LinkDB
All DBs
Position
1:complement(2610556..2611095)
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AA seq
179 aa
AA seq
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MSLPHVILTVLSTRDATGYDITKEFSASIGYFWKASHQQVYRELNKMAQNDQVTCVLEPQ
EGKPDRKVYSITDAGRGALGEWFEQPTAHPTVRDEFSAKLMACAVQPSDAYRVQLAELVE
ESRKLVSHYKEIEAAYYATPSTLDKQARLERLTLRRNLLIREAWIVWAEEVLLELGALA
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaccacacgtaattctaaccgttttaagtacacgcgatgctactggttacgat
atcacaaaagaattctccgcaagcattggttacttctggaaagctagccatcaacaagtt
taccgcgagctaaataaaatggctcagaacgaccaggtaacttgcgtgcttgagcctcaa
gaaggcaaacctgatcgtaaagtttactctatcactgatgctggccgtggcgcgctaggt
gaatggtttgaacaaccaactgcacacccaaccgttcgtgacgagttctcagctaagcta
atggcttgtgctgtacaaccttctgacgcttaccgtgtacaacttgctgagctagtagaa
gagtctcgcaaactggtttctcactacaaagaaatcgaagcagcttactacgcaacgcca
tcgacactagacaagcaagcacgccttgagcgtctaacacttcgccgtaacctacttatc
cgtgaagcatggattgtatgggctgaagaagtactgcttgaacttggcgctctagcttaa
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