Vibrio crassostreae: IS519_11885
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Entry
IS519_11885 CDS
T08776
Name
(GenBank) ABC transporter ATP-binding protein
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
vcra
Vibrio crassostreae
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
vcra03012
]
IS519_11885
Translation factors [BR:
vcra03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
IS519_11885
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
MMR_HSR1
KAP_NTPase
AAA_23
ABC_tran_CTD
MeaB
AAA_18
AAA_22
RsgA_GTPase
NB-ARC
AAA_16
AAA_30
DUF87
Motif
Other DBs
NCBI-ProteinID:
UPR28863
LinkDB
All DBs
Position
1:complement(2653328..2655250)
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AA seq
640 aa
AA seq
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MITFSDIQLLRGGKPLLDQASATFHPGDKIGLVGKNGCGKSTLFALIKDELSIDAGSFSK
PAHWEMAWVAQETPALERTAIEYVIDGDREYRGLEDQLEKAEQADNGTLVAEIHGKIETI
GGYSIKARAAELLDGLGFSQEQMTWNLTQFSGGWRMRLNLAQALLCRSDLLLLDEPTNHL
DLDAVMWLERWLQSYPGTLVLISHDRDFLDPIVNRIVHVENQQLNEYTGNYSSFETQRAQ
KLILQQAMYQKQQKQMSHMQSYIDRFRYKASKARQAQSRIKALEKMEQVLPAQFDNPFSF
EFREPDALPNPIMMMDEVSAGYDDNLILEKIRLNLVPGSRIGLLGRNGAGKSTLIKLLSG
ELQQQGGELSYSQGVKIGYFAQHQLETLHPEETPLQHMMQIAPKHTEQQLRDYLGSFGFQ
GEKALDKVAPFSGGEKARLVLALLVWQKPNLLLLDEPTNHLDLDMRQALTFALQTFEGAM
VIVSHDRYLLRATTDDLYLVHDRQVAPFDGDLSDYYKWLTEQQKVERKEAQALAPAKDGA
NSAAAKKEQKRKEAEFRKLTAPLRKKLTQFEKQMDKLTQALEEAEQELSDTSLYEAENKA
KLNKVLALQASSKSQLEEVEMDWMSTQEELEQMEQDMDSL
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgattactttctctgatattcaattgctacgcggcggtaagccactcctcgaccaagca
tctgcgacttttcaccctggcgacaagatcggtttggttggtaaaaacggctgtggtaaa
tctacgctattcgccttaattaaggacgaactgtcgattgatgcaggttcattcagtaaa
ccagcccattgggaaatggcttgggttgctcaagaaacacctgcattagaaagaacagca
attgaatacgtgattgatggcgaccgtgaataccgcggccttgaagatcaactagagaaa
gctgaacaagccgacaatggcacattggtagcagagatccacggcaagattgaaaccatt
ggtggttacagcataaaggcacgtgctgccgagttacttgatggcctaggctttagccaa
gagcaaatgacatggaacctgactcagttctcaggtggttggcgtatgcgtttgaaccta
gcgcaagccctactgtgtcgcagtgacctactgctactcgatgaaccgaccaaccacttg
gatttagacgcagtaatgtggctagaacgttggttacaaagctaccctggcacactagta
cttatctcgcacgatagagacttcttagaccctatcgtcaaccgtatcgtgcacgttgaa
aatcagcagctcaatgagtacacgggtaactactcatcgttcgaaacccaacgagcgcaa
aaactgattctgcaacaagcgatgtaccaaaagcagcagaaacagatgtctcacatgcag
agctacattgaccgtttccgttacaaagcgtcaaaggctcgccaagcgcaaagccgtatt
aaagcgctagagaaaatggaacaagtgctgcctgctcagtttgataacccattcagcttt
gaatttagagaaccagacgcgctaccaaatccaatcatgatgatggatgaagtatcagcg
ggctatgatgacaatctgattctagagaagattcgcttgaacctagtaccgggcagccgt
attggtctacttggtcgaaatggtgctggtaaatcaacactgattaaactgctttctggc
gaacttcaacagcaaggcggtgaactgagttattcgcaaggcgttaagattggttacttt
gcacagcaccagctagaaactctgcaccctgaagaaacaccgctgcaacacatgatgcag
attgcccctaagcacaccgagcaacaactgcgtgattacctaggtagtttcggtttccaa
ggtgaaaaagcgctcgataaagtggcacccttctctggtggtgaaaaagcgcgtttagta
ttagcgctactggtatggcaaaaaccaaacctgttgctactcgatgaaccaaccaaccac
ttggatctcgacatgcgtcaagcgctgactttcgccctgcagacgtttgaaggcgcaatg
gttatcgtatcgcacgaccgttacctactgcgtgcgactaccgatgatttataccttgta
cacgaccgccaagtagcaccgtttgatggtgacttaagcgattactacaagtggctaacc
gaacagcagaaagttgagcgcaaagaagcacaagcattggcaccagcaaaagacggcgcc
aacagtgcagcagcaaaaaaagagcagaaacgaaaagaagctgagttccgtaaactgacg
gcaccacttcgtaaaaagctcactcaatttgaaaagcagatggataaattaacgcaggct
cttgaagaagctgagcaagaattatccgacacttcactgtatgaagctgaaaataaggct
aaactgaataaagtactcgctctccaagcgagcagtaagtcacagctagaagaagttgaa
atggattggatgtccactcaagaagagcttgagcagatggaacaggatatggatagctta
tga
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