Vibrio crassostreae: IS519_12800
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Entry
IS519_12800 CDS
T08776
Symbol
rsmE
Name
(GenBank) 16S rRNA (uracil(1498)-N(3))-methyltransferase
KO
K09761
16S rRNA (uracil1498-N3)-methyltransferase [EC:
2.1.1.193
]
Organism
vcra
Vibrio crassostreae
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcra03009
]
IS519_12800 (rsmE)
Enzymes [BR:
vcra01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.193 16S rRNA (uracil1498-N3)-methyltransferase
IS519_12800 (rsmE)
Ribosome biogenesis [BR:
vcra03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
IS519_12800 (rsmE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltrans_RNA
PUA_4
CDC48_2
ProQ_C
Allantoicase
Motif
Other DBs
NCBI-ProteinID:
UPR29014
LinkDB
All DBs
Position
1:complement(2805956..2806687)
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AA seq
243 aa
AA seq
DB search
MRIPRIHHPERIHQLGSLALGEDAAGHVGRVLRMKEGQDVLLFDGSGAEFPATIAEVSKK
NVTVNVSERIERSSESPLDLHLGQVISRGDKMEFTIQKSVELGVNTITPLISERCGVKLD
TKRFEKKLAQWQKIAIAACEQCGRNTVPVIRPIMQLEEWCSEPSEALKLNLHPRAKYSIN
TLPEPISKVRLLIGPEGGLSAEEIGMTEQYKFEETLLGPRVLRTETAALTAITALQVRFG
DLG
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgagaatccctcgtatccatcacccagaacgcattcatcagttaggttcactcgcttta
ggcgaagatgccgcgggtcatgttggtcgtgtccttcgcatgaaagaaggccaagatgtt
cttctatttgatggcagtggcgctgaattcccagcgacgatagccgaagtatcaaagaaa
aatgtcaccgttaatgtttctgaacgcatcgagcgcagcagcgaatcaccgttagactta
catttaggccaagtgatttcacgtggtgacaaaatggagtttacgattcagaaatcggtt
gagcttggtgtgaacaccattacccctctaatttcagaacgctgtggcgttaagcttgat
acaaaacgcttcgagaaaaaactcgcacagtggcaaaagattgctatcgcggcgtgtgaa
cagtgtggccgcaatacggttccagtcattcgtccaattatgcagcttgaagagtggtgc
agcgaaccaagcgaagcactaaagctaaacctgcaccctcgtgcaaagtactcaattaac
acccttccagaacctatcagcaaggtgcgcctattgattggccctgaaggtggcttgtca
gctgaagaaatcggcatgactgaacaatacaaatttgaagagacgctactcggcccacgt
gtacttcgtaccgagacagcagctctaaccgcaattactgccttacaagtccgttttggc
gatctaggctag
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integrated database retrieval system
