Vibrio crassostreae: IS519_12975
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Entry
IS519_12975 CDS
T08776
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
vcra
Vibrio crassostreae
Pathway
vcra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IS519_12975 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcra03400
]
IS519_12975 (recO)
DNA repair and recombination proteins [BR:
vcra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
IS519_12975 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
IS519_12975 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
UPR29046
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All DBs
Position
1:2839985..2840713
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AA seq
242 aa
AA seq
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MSEGLQRCFVLHRRPYSESSLILDVFSEEFGRVTLMSKGARSKRSNLKGALQPFTPLLLK
WSGNGSMKTLRQAEPISLGLPLAGINLYSGMYVNELIGRVLMAEVPMPALFHDYLHALTE
LAHNDNPEPALRRFELALLSAMGYGVDFLHCAGTGEAIDPSMTYRYREQKGFIASVRRDN
LTFMGDELIAISERRFITKEQLKAAKRFTRIALKPYLGGKPLKSRELFMPTIALSRARSI
GK
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgaagggttacagcgatgctttgtgttgcaccgtcgaccatacagtgagtcgagc
ctgatcttggacgtcttcagcgaagagttcggtcgggtgacgttgatgtctaaaggcgct
cgcagcaagcgttccaatttgaaaggtgcattacaaccttttacgccgctactgcttaag
tggtctggtaatgggtcgatgaaaaccttacgccaagctgaacccatcagcttggggctt
cctctcgccggtattaatctgtattcaggcatgtacgtgaacgagcttattggtcgggta
ttgatggcggaagtaccgatgcctgcactttttcacgactatcttcatgctttaacagag
ctggcgcataatgataatcctgagccagcactgcgccgctttgagctggctctattatcc
gctatgggttatggcgtcgactttttacactgcgcgggcactggcgaagcgatcgatccg
agcatgacctatcgctatcgagagcagaaaggtttcatcgcttcggtgcgtcgagacaac
ctgacttttatgggcgatgaacttatcgcaatcagtgaacgtaggtttatcactaaagag
cagttaaaagcggcaaaacgctttacacgcatagccttaaagccgtatcttggcggcaaa
ccattaaaaagtagagagctatttatgccaacaatagccctctctagagcacggagtatt
ggaaaatga
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