Vibrio crassostreae: IS519_13035
Help
Entry
IS519_13035 CDS
T08776
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
vcra
Vibrio crassostreae
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcra03016
]
IS519_13035 (truD)
Enzymes [BR:
vcra01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
IS519_13035 (truD)
Transfer RNA biogenesis [BR:
vcra03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IS519_13035 (truD)
Prokaryotic type
IS519_13035 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
UPR29056
LinkDB
All DBs
Position
1:2854891..2855937
Genome browser
AA seq
348 aa
AA seq
DB search
MSDILSSLAYLNGKPTAKAKLKAKAEHFVVNEDLGFEFTGEGEHLMVRIRKTGENTSFVA
NELAKACGVKSKDVSWAGLKDRHAVTEQWLSVHLPKGEPDFSAFLAQYPSIEILATARHN
KKLRPGDLVGNQFELTLSEVTDCDDVVKRLEKVAQVGVPNYFGAQRFGNEGNNLSEARRW
GRDNVRTRNQNKRSLYLSAARSWIYNLILSDRIEQDAFASALVGDIVMKDGAQLAVTADN
IEAVNQDIANGSALVTVALAGDNALPTTDESQALEQKHLDSEPDLMALIRGNRMRHDRRE
ASLKPTDLTWEVNEDNVTLKFSLDAGCFATAIVRELVEEVHVERTYEQ
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatattttatcttcattggcttatctaaacggtaaaccaactgcgaaagcaaaa
ctaaaagcaaaagccgaacactttgtcgttaatgaagacttgggttttgagtttactggt
gaaggcgagcacctaatggttcgtattcgtaaaactggtgagaacacgagcttcgtagca
aacgagctggctaaagcttgcggtgttaagtcgaaagacgtgagctgggcaggtttaaaa
gaccgtcacgcggtgactgagcagtggttgagtgtacacctaccaaaaggtgagcctgac
ttttcagctttcttagcacagtacccaagcattgagatcttggcgacagcacgacacaac
aaaaagttacgtccgggtgatttagttggcaaccaattcgagctgactttgtctgaagta
acagactgtgatgatgtcgtaaaacgtttggaaaaagtcgctcaagtcggcgtgccaaat
tacttcggtgctcagcgttttggtaatgaaggtaacaacttatctgaagctcgtcgttgg
ggccgtgataacgttcgtactcgtaaccagaataagcgcagcttgtacctttctgcggct
cgctcgtggatttacaacctgatcctgtcagaccgtattgagcaagatgcatttgcatca
gcattggttggcgatattgtcatgaaagatggcgctcaactagcggtaacagcggacaat
atcgaagcagtaaaccaagacatcgcgaatggatctgcattggttactgttgctttggct
ggcgataatgctttgccaacgactgatgagtctcaagcgttagagcaaaaacatcttgat
tctgaacctgacctaatggcgctgattcgcggtaaccgcatgcgccatgaccgtcgtgaa
gcatcgttaaaaccaaccgatctaacttgggaagtgaacgaagataatgtcactcttaag
ttctctctagacgcaggttgtttcgcaaccgctatcgttcgtgagttggttgaagaagta
cacgtagaaagaacctacgagcaataa
DBGET
integrated database retrieval system
