Vibrio crassostreae: IS519_13210
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Entry
IS519_13210 CDS
T08776
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
vcra
Vibrio crassostreae
Pathway
vcra02024
Quorum sensing
vcra03060
Protein export
vcra03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
IS519_13210 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
IS519_13210 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IS519_13210 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vcra02044
]
IS519_13210 (ffh)
Enzymes [BR:
vcra01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
IS519_13210 (ffh)
Secretion system [BR:
vcra02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
IS519_13210 (ffh)
Eukaryotic Sec-SRP protein
IS519_13210 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
AAA_22
cobW
KTI12
T2SSE
AAA_30
Mg_chelatase
AAA_33
AAA_31
VirC1
APS_kinase
KAP_NTPase
AAA_19
ABC_tran
AAA_14
AAA_18
Rad17
AAA_16
NAT10_TcmA_helicase
ATP_bind_1
Thymidylate_kin
Motif
Other DBs
NCBI-ProteinID:
UPR29081
LinkDB
All DBs
Position
1:2887681..2889075
Genome browser
AA seq
464 aa
AA seq
DB search
MFDNLTDRLSKTLKNISGKGRLTEDNIKETLREVRMALLEADVALPVVRDFVKRVKEGAV
GVEVSKSLTPGQEFIKIVQAELEAVMGESNEALNLAAQPPAVILMAGLQGAGKTTSVGKL
SKLLTERDKKKVLVVSADVYRPAAIKQLETLASDVGVDFFPSSADQKPLDIANAAIDHAK
KKFYDVLLVDTAGRLAIDEEMMGEIKELHTAIKPVETLFVVDAMTGQDAANTAKAFGDAL
PLTGVILTKVDGDARGGAALSVRHITGKPIKFLGVGEKTDALEPFHPDRVASRILGMGDV
LSLIEDLQKNVDTEKAEKLAKKFKEKKGFDLEDFREQLGQMQNMGGMMGMMDKLPGMSQL
PDNVKDKVDDKMFKQMEAIINSMTMKERQRPDLIKGSRKKRIAAGSGTQVQDVNRMLKQF
TQMQKMMKKMQKGGMKGMMRNMQGMMGGGGGMGGMGGGFNPFGR
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataatttaacggatcgtctatccaaaacgctgaagaacatcagcggtaaaggt
cgtctgaccgaagacaatattaaagagacgctgcgtgaagtacgtatggcgctacttgaa
gccgacgttgcactgcccgttgtccgcgattttgttaagcgcgtaaaagaaggcgctgtg
ggtgttgaggtttctaaatctctaacgccgggtcaagaattcattaagatcgttcaagct
gaacttgaagcggtgatgggtgagtctaacgaggctcttaacctagcagcgcagccgcca
gccgttatcttaatggcgggtctacaaggtgcgggtaaaaccacatcggtaggtaagcta
tctaagcttctaactgagcgtgacaagaagaaagtcttggttgtgtctgccgacgtttac
cgtccagcggcgatcaaacagcttgaaacgttagcaagcgatgttggcgtagacttcttc
ccatcttcagctgatcaaaagcctcttgatattgcaaacgctgcaatcgaccacgcgaag
aagaaattctacgacgtgctacttgtcgatactgcgggtcgtttggctatcgatgaagag
atgatgggcgagatcaaagagcttcatactgcaattaaaccagtagagacactgttcgtt
gttgatgcaatgacaggtcaagatgctgcgaacactgcaaaagcctttggtgatgcgtta
ccactaaccggtgttatcttgacgaaagttgatggtgatgcgcgtggtggtgctgctctg
tctgttcgtcatatcacaggtaagccgattaaattcttgggtgttggtgaaaagactgac
gcactagaaccgttccacccagatcgtgttgcttctcgtatcttaggtatgggcgacgta
ctgtcgcttattgaagacttacagaaaaacgttgataccgagaaagcagagaaactggct
aagaagttcaaagagaagaaaggctttgaccttgaagacttccgtgaacagctaggtcag
atgcaaaacatgggcggaatgatgggcatgatggataagcttccaggcatgtctcagcta
ccggataacgttaaagataaagttgatgacaagatgttcaagcaaatggaagcgatcatc
aactctatgaccatgaaagagcgccaacgccctgacctaatcaaaggctcacgcaaaaag
cgtattgccgctggttctggtacacaggtacaagatgtaaaccgtatgcttaagcagttc
acccaaatgcagaagatgatgaagaagatgcagaaaggtggcatgaaaggcatgatgcgc
aacatgcaaggcatgatgggcggcggtggaggtatgggcggaatgggtggtggctttaac
ccgtttggtcgataa
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