Vibrio crassostreae: IS519_13295
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Entry
IS519_13295 CDS
T08776
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
vcra
Vibrio crassostreae
Pathway
vcra00010
Glycolysis / Gluconeogenesis
vcra00020
Citrate cycle (TCA cycle)
vcra00260
Glycine, serine and threonine metabolism
vcra00280
Valine, leucine and isoleucine degradation
vcra00310
Lysine degradation
vcra00380
Tryptophan metabolism
vcra00620
Pyruvate metabolism
vcra00630
Glyoxylate and dicarboxylate metabolism
vcra00640
Propanoate metabolism
vcra00670
One carbon pool by folate
vcra00785
Lipoic acid metabolism
vcra01100
Metabolic pathways
vcra01110
Biosynthesis of secondary metabolites
vcra01120
Microbial metabolism in diverse environments
vcra01200
Carbon metabolism
vcra01210
2-Oxocarboxylic acid metabolism
vcra01240
Biosynthesis of cofactors
Module
vcra_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vcra_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vcra_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
vcra_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
IS519_13295 (lpdA)
00020 Citrate cycle (TCA cycle)
IS519_13295 (lpdA)
00620 Pyruvate metabolism
IS519_13295 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
IS519_13295 (lpdA)
00640 Propanoate metabolism
IS519_13295 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
IS519_13295 (lpdA)
00280 Valine, leucine and isoleucine degradation
IS519_13295 (lpdA)
00310 Lysine degradation
IS519_13295 (lpdA)
00380 Tryptophan metabolism
IS519_13295 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
IS519_13295 (lpdA)
00670 One carbon pool by folate
IS519_13295 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vcra04147
]
IS519_13295 (lpdA)
Enzymes [BR:
vcra01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
IS519_13295 (lpdA)
Exosome [BR:
vcra04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
IS519_13295 (lpdA)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
Pyr_redox_3
GIDA
HI0933_like
FAD_binding_2
NAD_binding_8
AlaDh_PNT_C
FAD_binding_3
Thi4
DAO
Motif
Other DBs
NCBI-ProteinID:
UPR29098
LinkDB
All DBs
Position
1:2905567..2906997
Genome browser
AA seq
476 aa
AA seq
DB search
MSKEIKAQVVVLGSGPAGYSAAFRCADLGLETVLVERYSTLGGVCLNVGCIPSKALLHVS
KVIEEAKAMAEHGVVFGEPQTDINKIRIWKEKVVDQLTGGLGGMAKMRNVTVVNGFGKFT
GPNSILVEGEGEATTVNFDNAIIAAGSRPIKLPFIPHEDPRIWDSTDALELNEVPEKLLI
MGGGIIGLEMGTVYHSLGSKVEVVEMFDQVIPAADKDIVKVFTKRIKNKFKLMLETKVTA
VEAKEDGIYVSMEGKKAPAEAERYDAVLVAIGRVPNGALIDAEKAGIEVDERGFINVDKQ
MRTNVPHIHAIGDVVGQPMLAHKGVHEGHVAAEVISGKKHYFDPKVIPSIAYTEPEVAWV
GKTEKEAKAEGINYEVATFPWAASGRAIASDCADGVTKMIFDKDTHRVIGGAVVGTNGGE
LLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEVFEGSITDLPNKKAVKKKK
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaaattaaagcccaagttgttgtacttggttcaggtcctgctggttactca
gcggcattccgttgtgcggatttaggtctagaaacagtactagttgaacgttacagcact
cttggtggtgtatgtctaaacgttggttgtattccatcaaaagcacttcttcacgtttct
aaagtaattgaagaagctaaagcgatggcagagcacggcgttgtattcggcgagccacaa
acggacatcaacaagatccgtatttggaaagaaaaagtagttgatcaactaactggcggt
cttggcggtatggctaagatgcgtaacgttactgtagttaacggtttcggtaagttcact
ggtcctaacagcattcttgttgaaggcgaaggcgaagcaacaactgttaacttcgacaac
gcaatcattgctgcgggttctcgcccaatcaaacttcctttcatcccacatgaagaccca
cgtatttgggattctacggatgcactagaactaaacgaagtacctgaaaaactgcttatc
atgggcggcggtatcatcggtcttgagatgggtacggtttaccactctctaggttctaaa
gttgaagttgtagagatgttcgatcaagttatccctgctgcggataaagacatcgttaaa
gttttcactaagcgcattaagaacaagttcaagctaatgcttgaaactaaagtgactgct
gttgaagcgaaagaagacggtatctacgtttcaatggaaggcaaaaaagcaccagctgaa
gctgagcgctacgatgctgttcttgttgctatcggtcgtgttccaaacggtgcacttatc
gacgctgaaaaagcgggtatcgaagttgatgagcgtggtttcatcaatgttgataagcaa
atgcgtactaacgttcctcacatccacgcgatcggtgacgttgttggtcaaccaatgctt
gctcacaaaggtgtgcatgaaggtcacgtagctgctgaagttatctctggtaagaagcac
tacttcgaccctaaagtaatcccatcaatagcgtacactgagccagaagttgcttgggta
ggtaagactgagaaagaagcgaaagctgaaggcatcaactacgaagttgctactttccct
tgggctgcttctggtcgtgcaatcgcttctgactgtgcagacggcgtgactaagatgatc
ttcgataaagatactcatcgcgtaatcggtggtgctgttgttggtactaacggtggtgaa
cttcttggcgaaatcggcctagcaatcgaaatgggttgtgatgcagaagatatcgctctt
actatccacgctcacccaactctacacgagtctgttggtctagctgcggaagtattcgaa
ggttcaatcactgaccttccaaacaagaaagcagtgaaaaagaagaagtaa
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