Vibrio crassostreae: IS519_13610
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Entry
IS519_13610 CDS
T08776
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
vcra
Vibrio crassostreae
Pathway
vcra02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IS519_13610
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcra02000
]
IS519_13610
Transporters [BR:
vcra02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
IS519_13610
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Phosphonate-bd
Motif
Other DBs
NCBI-ProteinID:
UPR29155
LinkDB
All DBs
Position
1:complement(2988260..2989942)
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AA seq
560 aa
AA seq
DB search
MLANIKKTAIATAIIATATTGFASVATAAERSELTVHPKEYTTFVRNFNPYLGATNLHTT
TDFMYEPLVVFNEMHGNTPVFRLAENFKMSDDLMSVVFDIRKGVKWSDGETFSADDVVFS
FNLVKEKPELDQSGINSWVTSVEKLNDSQVKFTLTEANSNVPYEIAKVPVVPKHIWKDVK
DPSTFTNENPVGSGPFTEIDTFTAQLYIQCANPNYWDADNLDVDCLRVPQIANNDQFLGK
VVNSEMDWTSSFVPDIDRTYAAASPKHHYWYPPAGTQAFIVNFKHPDAAKHEALSNVDFR
RAFSMALDRQTIIDIAFYGGGTVNDFASGLGYAFEAWSDEKTHDKYKGFNTYNAEGAKKL
LADAGFKDVNKDGFVDTPSGKSFELMIQSPNGWTDFNNTVQLAVEQLNEIGIKAKARTPD
FSVYNQAMLEGTYDVAYTNYFHGADPYTYWNSAYNSSLQSGDGMPRFAMHFYKNDKLDGL
LNSFYKTADKNEQLDIAHGIQQIIAADQVTIPVMSGAYMYQYNTTRFTGWWNEENPKGRP
NIWAGIPERLLHVLDLKPVK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgcttgccaatataaaaaaaacagcaatagcaacagcaattattgcaactgctacaaca
ggttttgcatcagtagcaaccgctgcagaacgcagtgaactgaccgttcacccgaaagag
tacactacattcgtacgtaactttaacccgtaccttggagctactaacctacatactaca
actgacttcatgtatgagccgctagtagtatttaacgaaatgcacggtaacactccagtg
ttccgtctagctgaaaacttcaagatgtcagatgatctgatgagcgttgttttcgacatt
cgtaagggtgttaaatggtctgacggagaaactttctctgctgatgatgttgttttttct
ttcaaccttgtaaaagagaagccagagcttgaccaatctggtatcaactcttgggtaact
tctgtagaaaaactgaacgacagccaagttaagttcacactaacagaagcaaactcaaac
gtaccttacgagattgctaaagtacctgtagtacctaagcacatctggaaagacgttaaa
gatccatcaacgtttaccaatgagaacccggtaggttctgggccatttacagaaatcgat
acgtttacagcgcaactttacatccagtgtgcaaacccgaactactgggatgcagacaac
ctagatgttgactgtctacgtgttccacaaattgcgaacaacgaccaattcctaggtaaa
gttgtaaacagtgaaatggactggacgtcttctttcgttccagatatcgatcgtacatac
gcagcagctagccctaaacaccactactggtacccgccagcaggtacacaggcattcatc
gttaacttcaagcaccctgatgctgcgaagcatgaagcattgagcaacgttgacttccgt
cgtgctttctctatggctcttgaccgtcaaactatcatcgacatcgcattctacggtggc
ggtactgtgaacgatttcgcatcgggtcttggctacgcgtttgaagcttggtctgatgaa
aaaactcacgacaagtacaaaggcttcaacacttacaacgctgaaggcgcgaagaagctt
cttgctgacgctggcttcaaagatgtaaacaaagatggttttgttgacactccatcaggt
aagtctttcgaactaatgattcaatcgccaaacggctggactgacttcaacaacacagtt
caactagcggtagaacagctaaacgaaatcggtattaaagcaaaagctcgtacacctgac
ttctctgtttacaaccaagcaatgcttgaaggtacatacgacgtagcatacacaaactac
ttccacggtgcggatccatacacgtactggaacagtgcttacaactcatcactacaatct
ggtgatggtatgcctcgtttcgcaatgcacttctacaaaaacgacaagctagatggtctt
ctaaacagcttctataaaacagctgataagaacgagcagctagacattgcacacggtatc
cagcaaatcatcgctgcagaccaagtgacaatccctgtgatgtctggtgcttacatgtac
caatacaacacaactcgcttcactggttggtggaacgaagaaaatccaaaaggccgtcca
aacatttgggctggtattccagagcgtctacttcatgtactggacctaaaaccagttaaa
taa
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