Vibrio crassostreae: IS519_13740
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Entry
IS519_13740 CDS
T08776
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vcra
Vibrio crassostreae
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcra03016
]
IS519_13740 (truB)
Enzymes [BR:
vcra01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
IS519_13740 (truB)
Transfer RNA biogenesis [BR:
vcra03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IS519_13740 (truB)
Prokaryotic type
IS519_13740 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
UPR29179
LinkDB
All DBs
Position
1:3022746..3023699
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AA seq
317 aa
AA seq
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MARRRKGRPINGVILLDKPTGISSNDALQKVKRIYFAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYVVIAKLGERTNTSDSDGEVVETRDVNVTQEQLERCIASFKGETDQ
IPSMFSALKYQGKPLYEYARAGIEVPRESRKITVYSIELLRFEGDEVEMEVHCSKGTYIR
TITDDLGEMLGCGAHVTMLRRTGVAKYPYERMVTLEQLNEILEQAQAQEIAPKELLDPLL
MPMDTAVEDLPEVNLNAELTDLVQHGMPVQVAGAPTEGTVRMTSGEEKLFVGVAQIGEDG
RVAPKRLVVFRDEEPQA
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggctcgccgtcgtaaaggtcgccctatcaacggggtaattctattagataagccgact
ggcatttcgtctaatgatgcactgcaaaaagtaaagcgtatttactttgcagagaaggca
gggcacaccggtgctctggatcctcttgcgactggcatgctgccaatttgtcttggtgaa
gcaacaaagttctctcagtttcttctagattctgataagcgctacgttgttatcgctaag
cttggtgagcgtaccaatacctctgattccgatggtgaagtggtagagacacgtgatgtt
aacgtgactcaagaacagcttgagcgttgcattgcgagcttcaagggtgaaaccgatcag
ataccatcaatgttttcggcattgaagtatcaaggtaaacctttgtacgaatacgcacgt
gcaggtatcgaggttcctcgtgagtctcgtaagatcactgtgtactctattgaactgctt
cgctttgaaggcgatgaagttgaaatggaagtgcattgttcaaaaggcacatacatccgc
acaattaccgacgatcttggtgagatgctaggttgtggtgctcacgtgactatgcttcgt
cgtacaggtgtcgcgaagtacccgtacgagcgtatggtgactttggagcagttaaacgag
atcctagagcaagcacaggcgcaagaaattgcaccgaaagagctgcttgatcctctgctg
atgccaatggacactgccgttgaagacttaccagaagtaaacctgaacgcggaactgact
gacttagttcagcacggtatgccagttcaggttgctggtgcgccaactgaaggcacggtt
cgtatgacaagtggcgaagagaagctgtttgtcggcgtagctcagattggcgaagatggc
cgagttgcaccgaagcgtttggttgttttcagagatgaagagccacaagcgtag
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