Vibrio crassostreae: IS519_13780
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Entry
IS519_13780 CDS
T08776
Name
(GenBank) EAL domain-containing protein
KO
K20965
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vcra
Vibrio crassostreae
Pathway
vcra05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
IS519_13780
Enzymes [BR:
vcra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
IS519_13780
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_4
PAS_8
PAS_9
PAS
Motif
Other DBs
NCBI-ProteinID:
UPR29186
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All DBs
Position
1:complement(3031887..3033926)
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AA seq
679 aa
AA seq
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MPPQQLQHWFTQLTANSPFFFAVLDAQHNYFMVNERYCDIAGLSQTELAGMNDRQTLGEQ
FYQHLKPYYERAFSGETIEAEVTLNETDLDTSLHFSLSPLTNGNKTDYIVFHAFDTSENQ
VLVRSLEESEAKFHKLSQLLPDGLLLVESDYILSSNPAAARLLGFNSTTELIGEELGRLF
IDEQTKTVFNNDLSSIISESGLVCLTGARCGFERKVQLNIDSTTVLGSNTQLVLIQDAQE
TAKQYTPANSEDAYIDALTKLYNRVGFTKRLEQFIHNDTPVVMLYLDIDNFKNINDSLGH
HIGDKVIKEVASRLKRLLPRKAVIGHLGGDEFGIILPEPEHQRTPEMLAEKIISLINQPF
DLHHFSKRLACSIGSVSFPQDGTDARILLQNADTAMYEAKDRGRNRLIKFNEQMNKEARM
RLWLEIELQKALQQNGLEVWYQPKVNARDFTINGAEALVRWKHPVEGYISPAAFIPVAER
AGLIEQLGRVVMREVFATVKRWKMQGILPGRVAINLSPEQFGNPKLIDYMEKLLRSTELD
PSAITFELTESAVMSDSEHTLQMLNAIKKLGFALSIDDFGTGYSSLSYLARFPIDELKID
RAFISDIDTLPKQITVIENIINLGKSLDLTVVAEGVETSEQATLLSNLNCSSIQGFHFYR
PQPKQDVEELFAQNRRHKN
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgcctccccagcaactacaacattggtttacccagctaactgcaaatagtccgttcttt
tttgcagtacttgatgctcaacataactattttatggtaaatgagcgttactgtgatatt
gctggtttgagtcaaacagagcttgcaggcatgaatgaccgccaaacattgggcgaacag
ttctaccaacatcttaagccttactatgagcgtgcattcagtggcgaaacgattgaggcc
gaagtcaccctcaacgaaactgacctcgataccagccttcatttcagcctatctccgctt
accaatggcaacaaaaccgactacatcgtctttcacgccttcgatacatcagaaaaccaa
gtacttgtccgttctttagaagaatccgaagccaaattccacaagctatctcaattactt
ccagatggattactgctcgttgagagtgactacatcttgtcatccaacccagcggcagcg
cgcttgcttggctttaattcaaccacagagttaattggcgaagagttgggacgcctattt
atcgatgaacaaaccaaaacagtcttcaataatgacctcagctctattatttctgagtct
ggtttggtttgcttaacgggtgcacgatgcggctttgagcgtaaggttcagctcaacatc
gactccactactgttcttggaagcaacactcagttggtgcttatccaagacgcacaagaa
accgcaaaacaatacacaccggcaaacagtgaagatgcctacatagatgcactgaccaag
ctctacaaccgagttgggtttactaagcgtcttgagcagttcattcacaacgatacgccg
gtggtaatgctctatttagacattgataactttaaaaatatcaatgactcacttggtcat
cacatcggtgacaaggtgattaaagaggtcgcttcgcgccttaaacgcttattgcctcgt
aaggccgtgattgggcatttaggcggggatgagtttggtattatcctgccagaacctgaa
catcagcgaacacctgaaatgctcgctgaaaagatcatatctctgatcaatcaacccttc
gatcttcaccactttagcaagcgcttagcctgctcgattggtagcgtgagctttcctcaa
gatggtactgatgctcgtatcttgctgcaaaatgcagacacagcaatgtatgaagcgaaa
gatcgtgggcgcaaccgtctgatcaaattcaacgaacagatgaacaaagaagcgcgcatg
cgactgtggcttgagatagagctccaaaaagcactgcaacaaaatggacttgaggtttgg
tatcaaccgaaagtgaatgcccgtgatttcaccatcaacggcgctgaagctctggtacgt
tggaaacatcctgtcgaaggttatatcagtcctgctgcgttcatccctgtagcggagcga
gctggtcttattgaacaacttggccgagtggtgatgcgcgaagtatttgctacggttaag
cgctggaagatgcaaggtatccttcctggtcgtgtcgcgatcaatttgtctccagaacag
tttggtaacccgaaactgattgattacatggaaaagctactgcgttcgaccgagcttgat
ccaagtgcgattacgtttgagctaacggaaagcgcggtaatgagtgatagtgaacacaca
cttcaaatgcttaacgccatcaagaaacttggctttgctctatcgattgatgatttcggt
accggttactcttcactgtcttaccttgctcgcttcccaattgatgagcttaaaatagac
cgtgctttcatctctgatatcgataccctaccaaagcaaatcaccgtaattgaaaacatc
atcaacctaggtaaatctctcgatttgaccgtggttgcagaaggtgtcgaaaccagtgaa
caagcaactctgctgtctaatctcaactgtagttcgattcaaggcttccacttctaccgt
ccgcaaccaaaacaagatgtcgaagagttgtttgcccaaaaccgccgtcataagaactag
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