Vibrio crassostreae: IS519_15015
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Entry
IS519_15015 CDS
T08776
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
vcra
Vibrio crassostreae
Pathway
vcra00020
Citrate cycle (TCA cycle)
vcra00190
Oxidative phosphorylation
vcra00650
Butanoate metabolism
vcra00720
Other carbon fixation pathways
vcra01100
Metabolic pathways
vcra01110
Biosynthesis of secondary metabolites
vcra01120
Microbial metabolism in diverse environments
vcra01200
Carbon metabolism
Module
vcra_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vcra_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vcra_M00149
Succinate dehydrogenase, prokaryotes
vcra_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
IS519_15015 (sdhA)
00650 Butanoate metabolism
IS519_15015 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
IS519_15015 (sdhA)
00720 Other carbon fixation pathways
IS519_15015 (sdhA)
Enzymes [BR:
vcra01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
IS519_15015 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
GIDA
Pyr_redox_2
Thi4
FAD_binding_3
BEX
FAD_oxidored
Lycopene_cycl
OPA3
Ins_P5_2-kin
Motif
Other DBs
NCBI-ProteinID:
UPR29430
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Position
1:3299224..3300990
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AA seq
588 aa
AA seq
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MTIPVREFDAVVIGAGGAGMRAALQISEQGLSCALLSKVFPTRSHTVSAQGGITVALGNA
HEDHWEQHMYDTVKGSDYIGDQDAIEYMCKNGPESVIELEKMGLPFSRFENGTIYQRPFG
GQSKNFGGEQAARTAAAADRTGHALLHTLYQQNIKHKTTVFSEWYALDLVKNEDGAILGT
TALCMETGEVCYFKAKATILATGGAGRIYASTTNAHINTGDGVGMAIRAGVPMQDIEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMVEIREG
RGCDGPWGPHIKLKLDHLGKETLESRLPGVCELSRTFAHVDPVKEPIPVIPTCHYMMGGV
PTQVSGQAIKQTEDGSDVEIQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLG
ETLKKQDEAKPATEADIERSLERYNRWENSTDGEDPAQIRKDLQQCMQNNFSVFREGKAM
AEGLEELKAIRERLKNAHLSDKSTEFNTQRIECLELENLMETAFATAVAANFRTESRGAH
ARFDFPDRDDEQWLCHSLYNPESESMTKRGVNMEPIHREAFPPKARTY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
gtgactattcctgttcgtgagtttgatgccgtagttatcggcgctggtggtgcaggtatg
cgtgccgcactgcaaatttctgagcaaggcctttcttgtgcattgctttctaaagttttc
cctactcgttctcatacggtttcagcgcaaggcggcatcactgttgctcttggtaacgcg
catgaagatcattgggaacaacacatgtatgacacagtaaaaggttctgattacatcggt
gaccaagacgctatcgaatacatgtgtaaaaacggtcctgagtcggtaatcgaacttgaa
aaaatgggcctacctttctctcgttttgagaacggtactatttaccagcgtcctttcggt
ggtcaatcgaaaaactttggtggtgagcaagcggctcgtaccgcagctgcagccgaccgt
actggtcacgctctgcttcacacgctttaccaacaaaacattaaacacaaaacgaccgtt
ttctctgagtggtatgcactggatcttgttaagaacgaagatggtgcaatcttaggtact
actgcgctttgtatggaaacgggtgaggtttgctacttcaaagcgaaggcaacaatcctt
gctactggtggtgctggtcgtatctacgcatcaacaaccaatgcacatattaatactggt
gacggtgttggtatggcgatccgtgctggcgttcctatgcaagacatcgaaatgtggcag
ttccacccaacgggtatcgctggtgcaggtgtattggtaacggaaggttgtcgtggtgaa
ggtggttaccttctcaataaagacggcgaacgcttcatggaacgttacgcaccaaacgct
aaagacttagcgggtcgtgatgttgttgctcgttcaatgatggttgaaattcgtgaaggt
cgcggttgcgatggcccttggggtccacacattaagcttaagcttgatcacctaggtaaa
gagacgcttgaatctcgtcttcctggtgtatgtgaactttctcgtacctttgctcacgtt
gatccagtgaaagagccaatcccagtaatcccgacatgtcactacatgatgggtggtgtt
ccaacacaagtttctggtcaagctatcaagcaaaccgaagacggcagcgatgttgaaatc
caaggtctatttgcttgtggtgaaatcgcatcagtatcagtacatggtgccaaccgtcta
ggtggtaactcactgcttgatttagtggtatttggtcgtgcgacaggtctacacctaggt
gagacactgaagaagcaagacgaagcgaaacctgcaactgaagctgacattgaacgttca
ctagagcgttacaaccgttgggaaaacagcacagacggcgaagacccagcgcaaattcgt
aaagatcttcagcaatgtatgcagaacaacttctcggtattccgtgaaggtaaagcaatg
gctgaaggcttagaagagcttaaggcgattcgcgagcgtctgaagaatgcacacctatct
gataagtctacagagttcaacactcaacgtattgagtgtctagagcttgaaaacttgatg
gaaacggcattcgcaacggctgttgctgcaaacttccgtacagagagccgtggcgcacac
gctcgattcgatttccctgaccgtgatgatgagcaatggctatgccactcactttacaac
ccagagtcagagagcatgactaagcgtggtgtaaacatggaacctatccatcgtgaagcg
ttcccaccaaaagcacgtacgtactaa
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