Vibrio crassostreae: IS519_15040
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Entry
IS519_15040 CDS
T08776
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
vcra
Vibrio crassostreae
Pathway
vcra00020
Citrate cycle (TCA cycle)
vcra00640
Propanoate metabolism
vcra00660
C5-Branched dibasic acid metabolism
vcra00720
Other carbon fixation pathways
vcra01100
Metabolic pathways
vcra01110
Biosynthesis of secondary metabolites
vcra01120
Microbial metabolism in diverse environments
vcra01200
Carbon metabolism
Module
vcra_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vcra_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
IS519_15040 (sucD)
00640 Propanoate metabolism
IS519_15040 (sucD)
00660 C5-Branched dibasic acid metabolism
IS519_15040 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
IS519_15040 (sucD)
Enzymes [BR:
vcra01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
IS519_15040 (sucD)
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Gene cluster
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Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
UPR29435
LinkDB
All DBs
Position
1:3307233..3308105
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AA seq
290 aa
AA seq
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MSVLINKDTKVICQGFTGGQGTFHSDQAIAYGTQMVGGVSPGKGGQTHLGLPVFNTVREA
VEVTGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTTDMIDVKVKLEETGVRMI
GPNCPGLITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTCVGIGG
DPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAEFIKANVTKPVVSYIAGVTAP
PGKRMGHAGAIISGGKGTAEDKFAALEAAGVKTVKSLADIGKGLREITGW
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtattaattaacaaagacactaaagtaatctgtcagggtttcactggcggtcaa
ggtacattccactcagaccaagctatcgcatacggtacgcaaatggttggtggtgtttca
cctggtaaaggtggtcaaactcatctaggccttccagtattcaacacagtacgtgaagcg
gtagaagttactggcgcaacagcaacagttatctacgtaccagctcctttctgtaaagat
gcaatcctagaagcgattgatgcaggtatcgaactgatcgtaacgatcactgaaggtatc
cctacaacagatatgatcgacgttaaagtgaagctagaagaaactggcgttcgcatgatc
ggtcctaactgtccaggtcttatcactccagacgagtgtaagattggtatcatgcctggt
catatccacaagaagggtaaagtaggtatcgtatctcgcagcggtactcttacgtacgaa
gcagttaagcaaacaacagatgaaggctttggtcagtctacatgtgttggtatcggtggt
gaccctatcccaggttcaaacttcattgatatcctaaaacttttccaagaagacccagaa
actgaagcaatcgtaatgattggtgaaatcggtggtactgcggaagaagaagctgctgag
ttcatcaaagcaaacgtaactaagccagttgtatcttacatcgctggtgttactgctcct
ccgggcaagcgtatgggccacgcaggcgcaatcatctctggcggtaaaggtactgctgaa
gataagttcgcagcactagaagcagcaggcgttaagactgttaagtctcttgctgacatc
ggtaaaggcttacgtgaaatcacgggttggtaa
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