Vibrio crassostreae: IS519_15130
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Entry
IS519_15130 CDS
T08776
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
vcra
Vibrio crassostreae
Pathway
vcra00061
Fatty acid biosynthesis
vcra00071
Fatty acid degradation
vcra01100
Metabolic pathways
vcra01212
Fatty acid metabolism
vcra02024
Quorum sensing
vcra04146
Peroxisome
Module
vcra_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
IS519_15130 (fadD)
00071 Fatty acid degradation
IS519_15130 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
IS519_15130 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
IS519_15130 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vcra01004
]
IS519_15130 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vcra04147
]
IS519_15130 (fadD)
Enzymes [BR:
vcra01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
IS519_15130 (fadD)
Lipid biosynthesis proteins [BR:
vcra01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
IS519_15130 (fadD)
Exosome [BR:
vcra04147
]
Exosomal proteins
Exosomal proteins of breast milk
IS519_15130 (fadD)
Exosomal proteins of breast cancer cells
IS519_15130 (fadD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF4235
Motif
Other DBs
NCBI-ProteinID:
UPR29452
LinkDB
All DBs
Position
1:3328164..3329858
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AA seq
564 aa
AA seq
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MDKPWLSRYPSDVPETINPDQYPSLVEMFEQSVQKYADQPAFENMGSIMTFRKLEERSRA
FAAYLQNDLKLKKGDRVALMMPNLLQYPIALFGVLRAGMIAVNVNPLYTPRELEHQLNDS
GAKAIVIVSNFASTLEKVVDNTPVKHVVLTSLGQMLPRAKGTIVDFVVKYVKGMVPKYDL
PGAISFRKALHKGRRLQYVKPFMAGDDIAFLQYTGGTTGVAKGAILTHRNMIANVLQAKG
AYGPVLQEGRELVVTALPLYHVFALTVNCLLFVEMGGRNLLITNPRDIPGFIKELQKVPF
TAITGVNTLFNALVNNEDFHELDFSNLRLSVGGGMAVQRAVAEQWKKATGIHLLEGYGLT
ECSPLVTGNPYDLKDYTGAIGLPVPSTEVRIVDDEGKVIANDQVGELQVRGPQVMQGYWQ
RPEATKEVIDQDGWLSTGDIVKFDDEGLLYIVDRKKDMILVSGFNVYPNEIEDVVALHGK
VLEVAAIGQPHEVSGELVKIYVVKRDPSLTKEDIIAHCREHLTGYKIPKLVEFRDDLPKT
NVGKILRRVLREENDAELAKRASE
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
gtggataaaccttggctttcacgttatccaagtgacgtaccagaaacgatcaacccagat
cagtacccatctcttgtagaaatgtttgaacagtcggtacagaagtacgcggaccaacct
gcattcgagaacatgggctcgattatgacattccgtaagcttgaagagcgcagccgtgct
tttgccgcttacctacagaatgacttgaaactgaagaagggcgatcgcgtcgcgctaatg
atgccaaacctactgcaatacccaattgcactatttggtgtattgcgtgccggtatgatt
gcagtgaacgtcaacccactgtacacacctcgtgagcttgaacatcaactgaacgattct
ggtgcaaaggcgattgttatcgtatctaactttgcgagcacgctagagaaagttgttgat
aacacgccggttaaacacgtagttctaactagcctcgggcaaatgttgccacgcgcgaaa
gggacaattgtcgacttcgtagtgaaatacgtaaaaggcatggtgcctaagtatgatctg
ccgggtgctatctcattcagaaaagcgctgcacaaaggtcgtcgtcttcaatatgtgaag
ccgttcatggcgggtgatgacatcgcgttcctacagtacaccggtggtactacgggtgtt
gcgaagggcgcaatcctaacgcaccgcaatatgattgcgaacgtactgcaagcgaaagga
gcttacggtcctgttctgcaagaaggccgcgagttagttgtaacggcattaccgctttac
cacgtatttgcactgacggtgaactgcttactgtttgtagagatgggtggtcgtaacctt
ctaattactaaccctcgtgacattcctggctttattaaagagctacaaaaggttccgttt
actgcgattaccggtgtaaacacactgtttaatgcactagttaataacgaagatttccac
gagttggatttcagtaacctacgcctatctgttggcggcggcatggcggttcaacgcgct
gttgctgagcaatggaagaaagcgacaggcattcacctattggaaggctatggcttaact
gaatgttcaccactggtaacaggtaacccatacgaccttaaagactacacaggtgctatt
ggcctacctgtaccatcgacagaagttcgtattgttgatgatgaaggcaaggttattgct
aatgaccaagtaggcgagctacaagttcgtggtcctcaggtgatgcaaggctactggcag
cgccctgaagcaaccaaagaagtgatcgatcaagacggttggttatcgacaggtgacatc
gttaagtttgatgacgaaggcttgttgtacatcgttgaccgtaagaaagacatgattctt
gtatcaggcttcaacgtctacccgaacgagattgaagacgtagtggctctgcatggcaaa
gtgttagaagtagcagctatcggccagcctcatgaagtgtctggtgagctggttaagatc
tacgttgttaagcgtgaccctagcctgaccaaagaagacattatcgcgcactgtcgtgag
cacttaacgggttacaaaatccctaaattagtcgagttcagagatgatcttccaaagact
aacgtaggtaagatcttacgccgcgtactgcgtgaagaaaacgatgcagaacttgcgaaa
cgcgctagcgaataa
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