Vibrio crassostreae: IS519_15245
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Entry
IS519_15245 CDS
T08776
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
vcra
Vibrio crassostreae
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcra03016
]
IS519_15245 (truA)
Enzymes [BR:
vcra01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
IS519_15245 (truA)
Transfer RNA biogenesis [BR:
vcra03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IS519_15245 (truA)
Prokaryotic type
IS519_15245 (truA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
UPR29473
LinkDB
All DBs
Position
1:3356305..3357099
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AA seq
264 aa
AA seq
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MKIALGIEYNGTHYFGWQRQRDVKSVQEELEKALSVVANHPVEVMCAGRTDAGVHGTGQV
VHFETNVDRKMVAWTMGANANMPKDIAVRWATEVNEDFHARFSATARRYRYIIFNHALRP
GILNSGVSHYHGHLDEKKMHEAGQYLLGENDFTSFRATHCQSRSPWRNMIHLNVTRHGHY
IVIDIKANAFVHHMVRNITGSLIAVGKGEQKPEWIQWLLEAKDRKVAGATAKAEGLYLVD
VDYPEHFELPREPIGPLFLPDNLN
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgctttaggtattgaatataacggtacccactactttggttggcagcgccaa
cgagacgtgaaaagtgtccaagaagaattggaaaaggctctttcagttgtggcgaatcac
cctgtagaagttatgtgcgcaggtcgtacagatgccggtgttcacggtacgggacaagtc
gttcactttgaaactaatgtcgatcgtaaaatggtggcatggacaatgggcgcgaatgcc
aacatgcccaaagatattgcggttcgttgggcgacagaagtgaatgaggatttccatgct
cgtttctcggcaactgctcgccgttatcgctacattatctttaaccatgcactacgccca
ggtattttgaattcaggcgtgagccattatcatggtcaccttgatgagaaaaaaatgcat
gaagcgggtcagtacttacttggtgagaatgacttcacttcgttcagggcaacacactgt
caatctcgtagcccatggagaaacatgattcacttaaacgtgactcgtcatggacactac
attgtgatcgatattaaagcgaatgcgtttgttcaccacatggtgaggaatattactggt
agccttattgccgtaggtaaaggtgagcagaaaccagagtggatccagtggcttttagag
gccaaagatcgaaaagtggcaggtgcgactgcaaaagcggaaggtttgtatctggtggat
gttgattatcctgaacattttgagctaccacgagagccaattggtcctctatttttgccg
gataatttgaactaa
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