Vibrio crassostreae: IS519_15865
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Entry
IS519_15865 CDS
T08776
Name
(GenBank) ROK family protein
KO
K15545
transcriptional regulator of PTS gene
Organism
vcra
Vibrio crassostreae
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcra03000
]
IS519_15865
Transcription factors [BR:
vcra03000
]
Prokaryotic type
Other transcription factors
Others
IS519_15865
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GFIT
Motif
Pfam:
ROK
HTH_24
MarR
HycA_repressor
Motif
Other DBs
NCBI-ProteinID:
UPR29589
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Position
1:3494088..3495305
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AA seq
405 aa
AA seq
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MYMAQPGHIDHIKQVNAGRVYKLIDLKGPISRIDLSKQSELAPASITKITRELIEAHLIH
ETTVQEATTRGRPAVGLQTNNEGWQFLSMRLGRGYLTIALHELGGDVLIDTKIDIHERDQ
DDVLARLLHEIDEFFQTYAEQLDRVTSIAITLPGLVNSEQGIVLQMPHYNVENLALGPEI
YKETGLPVFIANDTRAWALAEKLFGNSQDNDNSVLISIHHGLGAGIILDGRVLQGRHGNI
GELGHIQIDKEGKLCHCGNRGCLETVASSQAIREQVKERLANGEESTLTVFEDVTIEQIC
AAAADGDPLAVEVIEQLGRYLGSAIAIVINLFNPEKILVGGVINQAKSVLYPAIQKCIEE
QSLSVYHKDLELVESRFYKQATMPGAALIKQALYDGQLLMKVIEG
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtacatggctcaaccgggccatattgatcatatcaaacaggtcaatgctggtcgtgta
tataaactaattgaccttaaaggtcctatttctcgtatcgatctgtccaagcaaagtgag
ttggctccggcgagtattactaaaattacccgtgaactcattgaagctcaccttattcac
gaaacgacggttcaagaagccacgactcgtgggcgtcctgctgtcggtctgcaaaccaat
aacgaaggttggcagtttctgtcgatgcgtcttggtcgcggatacttgacgatcgcgctc
catgaattgggcggcgacgtgcttatcgataccaagattgatatccatgaacgtgatcaa
gatgatgtgcttgcgcgtcttctccatgaaatcgatgagttcttccaaacctatgccgag
caactcgacagggtgacgagtatcgctatcacactgccaggcctggtgaattcagagcaa
ggtattgtgttgcagatgccgcactacaacgttgaaaacttagcgttggggccggagatc
tacaaagaaaccggtttgccagtttttattgccaatgatacccgagcgtgggcattagca
gagaagctgtttggtaactcacaagacaacgacaactctgttcttatctcgattcaccac
ggtttaggtgccgggatcattcttgatggtcgcgttctgcaagggcgtcacggtaacatc
ggtgagttggggcatatccagatcgataaggaaggcaagctttgtcactgtggaaatcga
ggctgtttagaaacggtggcgagctctcaggcaatccgtgagcaagtcaaagagcgactg
gcaaatggtgaagaatcaacgctaactgtgtttgaagatgtcactattgaacagatctgt
gctgccgctgctgatggggacccgctggctgttgaagtgattgaacagttaggtcgttac
ctaggttctgcgattgcgattgtgattaacctattcaacccagagaaaatcttggtgggt
ggtgttatcaatcaggcgaagagcgtgttatacccggcgattcaaaagtgtatcgaagag
cagagtctatcggtttaccataaagacttagaactggtggaatctcgtttttataagcag
gcaaccatgccaggtgctgcgcttatcaagcaggccttatacgatggtcaactgttaatg
aaagtcattgaaggttaa
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