Vibrio crassostreae: IS519_15935
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Entry
IS519_15935 CDS
T08776
Name
(GenBank) lipid A deacylase LpxR family protein
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
vcra
Vibrio crassostreae
Pathway
vcra00540
Lipopolysaccharide biosynthesis
vcra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
IS519_15935
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vcra01005
]
IS519_15935
Lipopolysaccharide biosynthesis proteins [BR:
vcra01005
]
Lipid A
IS519_15935
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxR
Motif
Other DBs
NCBI-ProteinID:
UPR29603
LinkDB
All DBs
Position
1:complement(3513210..3514199)
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AA seq
329 aa
AA seq
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MKYLRCLPLILLSFSSLASERSTLTFALDNDGIFGVDQDYTNGLFLGYTSSSITPYNWVK
PLSLSYWGASSLDKWEITIGHKMYTPSDIELETPSANDRPYAGYLHTEFNYISLNPQQAQ
RFNITFGTTGERALSEDAQKLVHSITKSDEPMGWEYQVDDEWAGSVGYLSHFNLMRNQAL
ANTDYEISNVSEINVGNFRSDISTGFMFRWGTDLGGNFGAANITTENPFKPGMIGASNTG
WFTYAGLEGRYRFNDLTIEGDRSEIEDNWPNPEQYDVTLENIQATAVLGVAWYNQYVGAS
FALTAKTPDYKEAKESVYTTGGITMFAFF
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacctgcgttgtttacccctgattcttctctctttctcatctctagcctctgag
cgttctacgctgacttttgctttagataacgatggtatttttggtgtcgaccaagactat
accaacggcttatttctgggttacacatcatcaagtattacgccatataactgggtaaaa
ccactgagcctttcttactggggcgcaagctctctagacaagtgggaaatcaccattggc
cacaagatgtacaccccttctgacattgagttagaaacaccgtcggctaatgatcgtcca
tacgcaggttacctacacactgaattcaattacatcagcttaaacccacagcaagcccaa
cgttttaatatcacgtttggtactacgggcgaacgtgcactctcagaagacgctcaaaag
ctggttcactcgatcactaaatcggatgagccgatgggttgggaataccaagtcgatgat
gagtgggcgggaagcgttggttacctaagccatttcaacctaatgcgtaatcaagctctt
gcgaatactgactacgaaatctctaacgtttctgaaatcaacgtcggtaactttagaagt
gatatctcgactggttttatgttccgttggggtacggacttaggcggtaactttggtgca
gctaacatcaccacagaaaacccattcaaacctggcatgatcggcgcatcaaacacaggt
tggtttacctatgcaggccttgaaggtcgctaccgatttaacgacctgactatcgaaggc
gatcgttctgaaatcgaagataattggccgaatccagaacaatacgatgtgactttagag
aacattcaggctactgctgtgcttggtgtggcttggtataaccaatacgttggtgcatct
ttcgcgctaaccgcaaaaactcctgattacaaagaagcaaaagagtctgtttataccact
ggcggtatcacaatgtttgctttcttctag
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