Vibrio crassostreae: IS519_16050
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Entry
IS519_16050 CDS
T08776
Symbol
clpA
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit ClpA
KO
K03694
ATP-dependent Clp protease ATP-binding subunit ClpA
Organism
vcra
Vibrio crassostreae
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
vcra03110
]
IS519_16050 (clpA)
Chaperones and folding catalysts [BR:
vcra03110
]
Heat shock proteins
HSP100
IS519_16050 (clpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
Clp_N
AAA_16
AAA_22
Sigma54_activat
TniB
AAA_7
AAA_14
AAA_18
TIP49
AAA_3
nSTAND3
IstB_IS21
bpMoxR
AAA_6
NACHT
Motif
Other DBs
NCBI-ProteinID:
UPR29625
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Position
1:3543268..3545541
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AA seq
757 aa
AA seq
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MLNKELETSLNGAFARARDKRHEFMTVEHLLLALLENDAAKEALQACQADLDALRNELDI
FIDQTTPLIPESDETRETQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESHA
AYLLKKNDISRLDIVNFISHGITKASNEGDSPSSSDSFGGAENAEEANSEDRLENFATNL
NEVAKQGNIDPLIGRDKELERTIQVLCRRRKNNPLLVGEAGVGKTAIAEGLAWRIVEGQV
PEIIQSSVIYSLDIGSLLAGTKYRGDFEKRFKAILKQLEKEEDAILFIDEIHTIIGAGAA
SGGQVDAANLIKPLLSSGKLRCIGSTTYQEYSSIFEKERALARRFQKIDIIEPSLDDTTK
ILIGLKPKYEAHHEVRYTNKALRAAVELSAKYINERHLPDKAIDVIDEAGARSRLAPASR
RKKTVSVADIESMVAKMARIPEKSVSSSDKDTLQKLDDRMKMLVFGQDPAIDVLSEAIKL
TRAGLGADNKPVGSFLFAGPTGVGKTEVTVQLSKLMGIELLRFDMSEYGERHSVSRLIGA
PPGYVGYDQGGLLTDAVIKNPHSVVLLDEIEKAHPDIFNLLLQVMDNGTLTDNNGRKADF
RNVILVMTTNAGVAETEKKSIGLIQQDHAPDAMGEIKKVFTPEFRNRLDNIIWFNSLDPS
VISQVVDKFIVELQVQLDARGVSLEVSEDARHWLADKGYDKTMGARPMGRVIQEKLKKPL
ANELLFGSLVDGGTVKVSLKKDELDFIYVGAKEEVMH
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgctaaataaagaattagagacgagtttaaatggcgcatttgctcgtgcgcgagacaag
cgacatgaattcatgactgtcgaacacctcctactagcattattagaaaatgatgcggcc
aaggaagcgctccaagcttgtcaggctgatctcgatgctcttcgcaatgagctcgatatt
tttatcgatcaaacgaccccacttatccctgaaagcgacgaaactcgcgaaactcagcca
acgttgagcttccaacgagtacttcaacgcgctgtttttcatgttcaatcttcaggtcgc
agcgaagtaacaggtgctaacgtacttgtggctatttttagtgagcaagaatctcacgcg
gcatatcttcttaagaaaaacgacattagtcgcttagatattgttaacttcatctcacac
ggtattactaaagccagcaacgaaggcgacagcccttcatcatctgattcatttggtggt
gcagaaaatgctgaagaagctaattcagaagatcgtttagaaaactttgctactaacctt
aacgaagtcgcaaaacagggcaatattgacccattaatcggtcgcgacaaagagctagaa
cgtactatccaagttctatgtcgtcgtcgtaagaacaaccctctgttagtgggtgaagcg
ggtgtaggtaaaactgccatcgcggaaggtcttgcatggcgcatcgttgaaggacaagtg
cctgaaatcattcagagtagcgtgatttattctttagatattggctcactgctagcagga
accaagtatcgtggtgactttgagaaacgttttaaagcgattcttaagcaactggagaaa
gaagaagacgcgattctgttcatcgatgagatccacaccattattggtgcgggtgctgca
tcggggggtcaggttgatgcggcaaacttaattaaaccactactaagcagtggtaaatta
cgttgcatcggttcaacaacgtaccaagagtacagcagtatttttgagaaggagcgtgct
ttagctcgtcgcttccagaaaatcgatattatcgagccatcgctagacgatacgaccaag
atcctgattggcttgaagccaaaatacgaagctcaccacgaagtgcgctacaccaacaaa
gcgttgcgtgccgctgtggaactgtcagctaaatacattaatgaacgtcaccttccagat
aaggccattgacgtaatcgatgaagcgggcgctcgtagccgtttggcacctgcaagccgt
cgtaagaaaacggtaagcgtggctgatattgagtcaatggttgcgaaaatggcgcgtatt
cctgagaagtcagtatcgtcttcagacaaagatacactgcagaaactggatgaccgcatg
aaaatgttggtattcggacaagaccctgcaatcgatgtattgagtgaagcgattaagctg
acccgtgctggattgggtgcagacaataaacctgttggttcattcttatttgctggtcct
actggtgtaggtaaaacagaggtgacggttcaactgtctaagttgatgggtattgagctt
ctacgctttgatatgtctgagtacggtgagcgtcactctgtgagccgcttgatcggtgct
cctcctggttatgttggttacgatcaaggtggtttgctaactgatgccgtaatcaagaac
ccgcactctgttgtgttactggatgaaatcgagaaagctcacccagatatctttaacttg
ctactgcaggtaatggataacggcacgctaactgataacaatggtcgcaaagcggacttc
cgcaacgtgattctagtgatgacgaccaacgcaggtgtggctgaaaccgagaagaaatcg
atcggcctgatccaacaagatcatgcaccagatgcgatgggcgaaatcaagaaggtattt
actcctgagttccgtaaccgtcttgataatatcatttggttcaacagccttgatccaagt
gtgattagccaagtcgttgataagttcattgttgagcttcaggttcaactggacgctcgt
ggtgtgtctttagaggtttctgaggatgctcgtcactggttagctgataaaggctatgac
aagaccatgggtgctcgtccaatggggcgtgtgattcaagagaagcttaagaagccactt
gctaacgagttactgtttggtagcttggttgatggcggtacggttaaagtatccctgaaa
aaagacgaattggatttcatctatgttggtgctaaagaagaggttatgcactaa
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