Vibrio crassostreae: IS519_16790
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Entry
IS519_16790 CDS
T08776
Symbol
choW
Name
(GenBank) choline ABC transporter permease subunit
KO
K02001
glycine betaine/proline transport system permease protein
Organism
vcra
Vibrio crassostreae
Pathway
vcra02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IS519_16790 (choW)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcra02000
]
IS519_16790 (choW)
Transporters [BR:
vcra02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
IS519_16790 (choW)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
UPR32206
LinkDB
All DBs
Position
2:complement(69894..70736)
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AA seq
280 aa
AA seq
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MNFITENKIPVGQWMEAGVDWLTINAAGFFDAISIFLETVIMFLVDVFKWMPPALPIVIT
AAIAWYLHRKPSLVIFVVAALLTILNLGYWQEMLETFVLVFAATTISVLIGVPVGIMAAH
RPWLYTMLRPILDLMQTVPTFVYLIPTLVLFGLGIVPGLISTIIFAIAAPIRLTYLGVTK
VPEELIEAGKAFGASRMKLLLKVELPAALPSIMAGVTQCIMLSLSMVVIAALVGADGLGK
PVVRALNTVNISQGFEAGLAIVLVAIILDRLCKTPNQKEA
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
gtgaattttattacggaaaacaaaatccctgtcggacaatggatggaagcgggtgttgat
tggctaacaatcaatgcagcaggattctttgacgctatttcgatttttctagaaaccgtc
attatgtttttagtcgatgtatttaagtggatgccgcctgcactgccaatcgtgattact
gctgcgattgcatggtatttacaccgtaaaccttcgctagtgatctttgtggtcgcggca
ctgctgactattcttaacctcggctactggcaagaaatgctggaaacctttgttctcgtc
tttgcggcgacaacgatttccgtattaattggcgtaccggttggcatcatggctgcccac
cgtccttggctctatacgatgttgcgcccaattctcgatttaatgcagaccgttccgacg
tttgtgtatctgattccaactctggttctattcggtttaggcatcgtgcctggcttaatc
tcgaccattattttcgcaatagctgcaccaattcgtttgacctacttaggggtaacgaaa
gtccctgaagagctgattgaagcgggtaaagcctttggtgcaagtcgcatgaagttactg
ctcaaagttgaattacctgccgctctgccaagcatcatggcgggtgtcacccaatgcatt
atgttgtcgctttcgatggtggttatcgccgctcttgttggtgctgacgggcttggtaaa
cctgttgttcgtgcattgaacacagtgaacatctcacaaggttttgaagccggattagcg
attgttttagtcgcaatcatccttgaccgcttgtgcaaaacaccaaaccagaaggaagct
taa
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