Vibrio crassostreae: IS519_17680
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Entry
IS519_17680 CDS
T08776
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vcra
Vibrio crassostreae
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcra03400
]
IS519_17680 (phrB)
Enzymes [BR:
vcra01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
IS519_17680 (phrB)
DNA repair and recombination proteins [BR:
vcra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
IS519_17680 (phrB)
Prokaryotic type
IS519_17680 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UPR32375
LinkDB
All DBs
Position
2:complement(270895..272310)
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AA seq
471 aa
AA seq
DB search
MSDILWIRRDLRIHDNPALVAAIENGVSIAVFISTPQQWQQHHLAPIKADFIYRHLKQLD
SQLAEFGITLLHLKATDFDDQSKQLIDLCQQLDAKCVYANSEPEVDEQARDKKLISSGLN
LKISDCDVMLPLGSVLNKQGEMFKVFTPFKNAWLKEVQVKGIICSPAPVMATERSQTQLP
DDLQALTLSADYDFDFPRVDSSRWPLSQDVLGNVIPNFLGNKVNDYARLRDIPSVKGTSG
LSPYLAIGAVSPRWLAIQLIQQQPDLLFDTQLPAFCWLNELIWRDFYKHLMFHHPKLVKG
ANFQQKYNGLDWYHDHPSFKAWCEGKTGYPLVDAAMRQLVETGWMHNRLRMVVASFLTKH
LLIDWRWGERFFMSHLIDGDFSANNGGWQWASSTGCDAQPYFRIFNPITQSEKFDPKGIF
IRKYIPELQNIPDKHVHFPHDFIAKNGIDSEYWQPIVEHKEARLRALAFFK
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgacatactatggatacgacgagacctgcggattcacgataacccagcgctcgtc
gcagcaattgaaaacggcgtatctatcgccgtttttatttcaaccccacagcaatggcag
caacaccaccttgcaccaatcaaagctgatttcatctatcgtcatctaaaacaactcgat
tcccagctcgctgaattcgggataacgttgcttcacttgaaagcgaccgattttgacgac
caatccaaacagctcatcgatttgtgccagcagcttgatgccaagtgcgtctacgctaac
tctgaaccagaggtcgacgaacaagctcgcgataaaaagctgatttcaagcggcctaaac
ctgaagatcagcgattgtgacgttatgctgccactcggtagcgttctcaacaaacaaggc
gagatgttcaaagtctttacgccctttaagaacgcttggttaaaagaagttcaggtgaaa
ggcatcatctgtagtccagctcctgtcatggcgactgaacgttcacaaacacagcttcct
gacgacttacaagccttaaccctctccgctgactatgatttcgattttccgcgtgttgat
tcgagtcgctggccattaagccaagatgtattgggcaatgtgatccccaatttcttaggc
aataaagtcaacgactacgcacgtctgagagatattccctcagttaaaggaacatcgggg
ctatcaccttatttagcgattggcgcagtgagcccacgttggttagcgattcaattgatt
cagcaacaacccgatctgttatttgatacgcaattaccggccttttgttggctcaacgaa
ttgatttggcgagatttttataagcatttgatgttccaccaccctaaactggttaaaggc
gctaactttcagcaaaaatacaatggtttagattggtatcacgatcatcctagcttcaaa
gcttggtgcgaaggaaaaacaggatatccattggttgatgcagcaatgcgtcaactggtt
gaaacgggctggatgcacaacaggctaagaatggtggtggcaagcttcctaaccaagcac
ctgcttattgactggcgttggggcgaacgtttctttatgtcacaccttatcgacggtgac
tttagtgccaacaatggtggctggcagtgggcttcaagtacgggctgtgatgctcaacct
tacttccgaattttcaatccaatcactcagagtgaaaagtttgatccaaaaggaattttt
attcgtaagtacataccagagctgcaaaatatcccagataagcatgtgcatttcccacat
gactttatcgctaaaaacggaatagacagcgaatactggcaacccatcgttgagcataaa
gaagcacgattgagagccttagccttcttcaaataa
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