Vibrio crassostreae: IS519_18555
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Entry
IS519_18555 CDS
T08776
Name
(GenBank) L,D-transpeptidase family protein
KO
K19236
L,D-transpeptidase YcfS
Organism
vcra
Vibrio crassostreae
Pathway
vcra01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
IS519_18555
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vcra01002
]
IS519_18555
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vcra01011
]
IS519_18555
Peptidases and inhibitors [BR:
vcra01002
]
Cysteine peptidases
Family C82
IS519_18555
Peptidoglycan biosynthesis and degradation proteins [BR:
vcra01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
IS519_18555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
LysM
Motif
Other DBs
NCBI-ProteinID:
UPR32543
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All DBs
Position
2:474357..475331
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AA seq
324 aa
AA seq
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MSHCANSTPLPSMKTRLHRAVSLVVKTTLLASGIASSWVSAATFELPPTESRIVGRIQQH
EVAAGETLAIIAKQYDIGFLSLMAANKGVDPFLPAEGYVLSIPSRLILPDTPRKGIVINL
AELRLYYFEPEKNQVHVFPVGIGRVGRDTPEMITKISQKRPNPTWTPPNSIRKEYLEKGI
ELPRVVPAGPENPLGEYALRLAYGAGDYLIHGTNKDFGIGLRVSSGCIRMEPKDIEWLFE
QVNRGEQVTIINEPIKMSLEPDRSVFVEAHEPLTRSDGSKKSLQIPVELKWWLEDAELPN
SKAKAVIFAQNGVPVEIAPPVIEF
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcattgcgctaactcgacgcctttaccgtcaatgaaaacacgacttcacagggcg
gtgtcgcttgttgtaaaaactactttgcttgccagcgggatagcttcatcgtgggtgtct
gctgcaacctttgaattgccaccaacagaaagccgcattgtgggcagaatccagcagcac
gaagtggcggcgggcgaaaccttggccatcattgccaagcaatacgatattggttttctc
tctttaatggcagccaacaaaggggtggatccttttctccctgccgaaggctatgtgtta
agcattccaagccgcttgattctacctgatactccaagaaaggggatcgtcatcaatctt
gctgagttaaggttgtattactttgagcccgagaaaaatcaggtgcatgttttccctgtc
ggcatcggtcgagtggggcgcgatactcccgagatgatcaccaagataagccaaaaaaga
ccgaatccaacatggacgccaccaaattcaatccgcaaagagtatcttgaaaaaggcatt
gaattaccgagagtggttcccgctgggccggaaaatccattgggtgagtatgctttgaga
cttgcttatggcgctggcgactatttgatccatggtactaacaaagacttcggaataggt
ttacgagttagctctggttgtatccgaatggaacctaaagatattgagtggctatttgag
caagtgaaccgtggtgaacaggtcaccattatcaatgagccgattaagatgtcattagaa
ccagatagaagtgtgtttgttgaagcgcacgagccattaactcgaagtgatggttcaaag
aaatcattacagatccctgtggaactaaaatggtggcttgaagacgcagaactgccaaat
tcaaaggcgaaagcggttatctttgctcaaaacggcgtacctgtagagatagcaccacct
gtgattgagttttaa
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