Vibrio crassostreae: IS519_19275
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Entry
IS519_19275 CDS
T08776
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
vcra
Vibrio crassostreae
Pathway
vcra02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IS519_19275
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcra02000
]
IS519_19275
02044 Secretion system [BR:
vcra02044
]
IS519_19275
Transporters [BR:
vcra02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
IS519_19275
Secretion system [BR:
vcra02044
]
Type I secretion system
Adhesin protein transporter
IS519_19275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
Neur_chan_memb
EcsB
AAA_25
AAA_30
AAA_16
USP8_interact
AAA_28
NB-ARC
DO-GTPase2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UPR32678
LinkDB
All DBs
Position
2:648465..650624
Genome browser
AA seq
719 aa
AA seq
DB search
MVEQKDSWLGCVEWLCEHFNVRSHPSKIVSGLPLDEGRLNESLFPRAIEKSGLTLSHVKK
ELLNQCQFPVVAVESATGFPLVVTQSSGGDFQVLNCESNLSQPILLKDLVIKVDSFVWQV
GAQALDDARVQAHERSDSKSNTRWLWRVVKEVKPWYRDLFIASFLINVLALVVPLFTMNV
YDRVVPNQAFNTLWVLAAGVGIVVIFDWVLRSSRSSVTDMAGRYIDNKLSSQLFSKVLGM
KLENRPQSVGAFARQLQDFDSVKDFFTSFSLVTLVDLPFTLLFLLLIGWLGGAMMFIPVA
IMLVLIVLSIAMKGKVEKTFDETARLSTQRQAQLFDCLTTLPDIKQNNAEGITQKRWEQT
ISSLSQWQTQSRHYSNIVTHSIQSSQQIVTITLIIFGVYQISEGLLSMGGLIAVVMLSGR
AASSVNQLSLLLLRFQQTRSAVEGLNQIMELPQEESKHQVIDKGDFDGGVRLDEVTFTYP
DTQSPALKEISLEIKPGERVGLVGAAGAGKTTLLSIVARQYLPTTGQAFYQEIDGQLWPT
SVLRSGMGWVGQTTNLIFGSVYDNVTLGATNVDEEKLRQALQQSGLNGYMGRLSNGLETP
VGEGGRLLSGGQRQAVAIARALYRCPKLLIMDEPTSALDNQAEIQFFNALQSMPRETSML
ISSHKSSFLMMCDRVIVLDKGQIVAEGEPKEILSLQKKSVPKGTSRFKTVSVVKGGRHE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
ttggtagaacaaaaagacagctggctaggttgtgttgagtggttgtgtgagcattttaat
gttcgcagtcacccttccaaaatagtgtctggcctacctttagatgaaggcaggctcaat
gaatccctttttccaagagcgattgagaaatcggggttaacgctgagccacgttaaaaaa
gaattactgaatcaatgtcagttccctgttgttgctgttgagtccgcgacagggtttcct
cttgtcgtaacccaaagctccggtggcgactttcaagtattgaattgtgaatccaactta
agccaaccaattctccttaaagacttagtcattaaagtggactcatttgtttggcaagtc
ggtgctcaagcgcttgatgacgcccgtgttcaggcacatgagcgcagtgacagtaaatcc
aacacccgttggttgtggcgcgtggtcaaagaagtgaagccttggtatcgcgatctgttt
atcgcttcgttcttgatcaacgtgcttgcgctggtggttccgttatttaccatgaatgtg
tacgaccgtgttgtgccaaaccaagcgtttaacacgctttgggtattagcagcaggcgtt
ggtattgtggttatttttgattgggtattgagaagctcacgaagctctgtgactgatatg
gctgggcgctatattgataacaagttgtcttctcagctgttctcgaaagtccttggtatg
aagctcgaaaatcgacctcaatcggtaggcgcatttgcaagacagcttcaagactttgat
agcgtgaaagatttcttcacttcgttctcgttagtcactctggtcgacctgccattcact
ttgttattcctactgcttatcggctggcttggtggcgcgatgatgttcattcctgtcgcg
atcatgttggtcttgatcgtgctgagcatcgcgatgaaaggcaaagttgagaaaacattc
gatgaaaccgcacgtttgtcgacacaaagacaagcacagctgtttgattgcttaacaacc
cttccggatatcaagcaaaacaatgctgagggtattacccagaagcgttgggaacagacg
atttcgtcgctctctcaatggcagactcaatctcgtcattactccaatatcgtgacgcac
tctattcagtccagtcagcagatcgtgaccatcactctgatcatttttggtgtgtatcag
atctctgaaggcttgctgagtatgggtggtttgatagcggtggttatgttgagtgggcgc
gctgcaagttcggtgaaccagctttctcttctattgctgaggttccaacaaacacgttcg
gccgttgaagggctgaatcagattatggagctacctcaggaagagtccaaacaccaagtt
atcgacaaaggagactttgatggtggggttaggttagatgaagtgacgtttacttatcct
gacactcaaagccctgcattaaaggagatttcccttgagatcaaaccgggtgagcgagtt
ggtcttgtgggcgcggcaggcgcgggtaaaacaaccctactatcgattgttgctcgccag
tatttgccaacaacaggacaagctttctatcaagagattgatgggcaattatggccaacc
agcgttctgcgtagtggcatgggctgggtggggcaaaccaccaatcttatttttggcagt
gtttacgacaacgttacgcttggtgcgaccaacgttgatgaagaaaagctaaggcaagcg
cttcaacagtcgggtttgaatggttacatgggccgcttaagcaatggccttgaaacacct
gttggtgagggcggtcggttactttctggtggtcagcgccaagccgttgccatcgcgaga
gctctgtatcgttgtccaaagttattgattatggatgagccaaccagtgcattagataat
caagctgagattcagttcttcaatgcgctgcaaagtatgccgagagaaacctcaatgctg
atcagctcccacaaatcttcattcctgatgatgtgtgatcgagtgattgtattggataaa
ggtcaaatcgtggcagaaggtgagcctaaagaaattctctctttacagaagaaaagtgta
cctaaaggaaccagtcgctttaagacggtatctgtggtgaagggaggtcgtcatgagtaa
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