Vibrio crassostreae: IS519_19505
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Entry
IS519_19505 CDS
T08776
Name
(GenBank) type III PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
vcra
Vibrio crassostreae
Pathway
vcra00300
Lysine biosynthesis
vcra00470
D-Amino acid metabolism
vcra01100
Metabolic pathways
vcra01110
Biosynthesis of secondary metabolites
vcra01120
Microbial metabolism in diverse environments
vcra01230
Biosynthesis of amino acids
Module
vcra_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
IS519_19505
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IS519_19505
Enzymes [BR:
vcra01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
IS519_19505
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Gene cluster
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DAHL
Motif
Other DBs
NCBI-ProteinID:
UPR32723
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Position
2:complement(701280..702482)
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AA seq
400 aa
AA seq
DB search
MLNSPQLPASIHQEIQQLAKQQTQPLCAYLYDLDALEQHIKQMRHVLPKNVELFYAAKAN
PSAPILRTLAPYVDGFEAASGGELTHLHQQQLNKPLIFGGPGKMLSELEQAIELDVDAIH
VESLTELQRIGALTQRLNRPASIFLRMNIDIGDITLSKLAMGGKPTPFGLDEGELNNALM
YLRDFPLIKLKGFHFHLMSHQLKVDRHLALMQRYFQVVKEWQKTFSLDELIINLGGGMGI
NYQNPQQHFPWMEFCDKLEFLIAKEHMQDWKLRFECGRYISAPCGYYVMEVLDIKQNLGE
NFVIARGGTHHFRTPAAQNHDHPFVIVKSNQQPTISHPISHATATLVGQLCTPKDVMARN
QHIEQVDIGDYVVFTLAGAYAWNISHQNFLMHEPPVFHYF
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcttaattcacctcaacttcctgcgagcatccaccaagaaattcagcaattggccaag
caacaaacgcaaccattatgtgcttatctttatgatctcgatgcattggagcagcacatt
aagcagatgcgccatgtattgccgaaaaacgttgaactattttacgccgcgaaagcgaac
ccttcagcgccgatactgcgcactttagccccttatgttgatggttttgaagcggcatca
ggcggagagcttacacacctccaccagcaacaactcaataaaccactgatctttggtggc
ccagggaaaatgctaagtgaactggagcaagcaattgaactcgatgtcgatgctattcat
gtcgaaagcctcactgagttacaacgcattggtgctttaactcagaggttaaatcgacct
gcttcgatcttcttgcgtatgaacatagacattggtgacatcacacttagcaagttagcc
atgggtggaaaacccactccatttggactcgatgagggtgaactcaataacgccttgatg
tatctgcgcgactttcccttgatcaagctaaaaggcttccacttccacctgatgtcgcat
caacttaaagtcgatcgccacctcgccttgatgcaacgttatttccaagtcgtcaaagag
tggcaaaagacgttctcactcgatgagctgatcatcaaccttggtggagggatgggaatc
aattaccaaaacccgcagcaacactttccttggatggagttctgcgacaagttggagttc
ttgattgctaaagaacatatgcaagactggaagctacgttttgaatgtggccgctatatc
tcggcaccgtgcggctattatgtgatggaggtactggatattaagcaaaaccttggtgag
aacttcgtgattgcacgtggtggaacacatcatttccgtacaccggctgcacaaaaccat
gatcacccttttgtgatcgtaaaaagtaatcaacaacccaccatttcacatccgataagc
catgctaccgccacactagttggacaactttgcacgccaaaagatgttatggcacgaaat
caacatatcgagcaggtcgatatcggtgactatgtggtgttcactctagcaggcgcttat
gcttggaacatctcgcatcaaaacttcttaatgcatgagcctccggtgtttcattatttc
tag
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