Vibrio crassostreae: IS519_19640
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Entry
IS519_19640 CDS
T08776
Name
(GenBank) winged helix-turn-helix domain-containing protein
KO
K03765
transcriptional activator of cad operon
Organism
vcra
Vibrio crassostreae
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcra03000
]
IS519_19640
Transcription factors [BR:
vcra03000
]
Prokaryotic type
Other transcription factors
Others
IS519_19640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trans_reg_C
TPR_1
TPR_2
Motif
Other DBs
NCBI-ProteinID:
UPR32749
LinkDB
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Position
2:735649..737208
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AA seq
519 aa
AA seq
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MLEKNISFIVDEWQFMPNEGQIQFADSCITIDNRLTKLLEFLCLNPGLTHTRDELIEEVW
NGSVLTDQVVTQAVFELRKVLKTHSKKTSSYIVTVPKRGYRFDGEVKVEKVELQKPDFQK
TTLQKTALQKPEQLDVNERQSMPEAKEFVKREDREEGYVKPSENSPRSRKLHYILAFLAV
VIVLQSSYMWFSQNKQNPSQASSAHSLSHYEFRYVVLNVTEEVKAQPELYGIVIKLIEHI
GFYSNIRVVKSDEHKKLAAIEFNISTAKSSDGKKTRLLVKYVNRASGGVHLNRRYSTNFA
RFHETFAAMIDDLLRAMYIDVPEEELKRNISVFPQDKESVKALMSATGVSYSTVDFDMAL
KHFREARALAPDNAYAISVSYISEVLTVFSTDEENIKPRIKALNEQYSSSLSAILKRGNN
PRVCEANAILALSQSEPDKALKILLSIPYNQHTPLTYLLMAKAEEARGNTMGAKELYLQA
TQNTSSPIALTLAGPLFFDSNLDKLIEQLQGVKLDVDGK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgcttgagaaaaacatcagttttatcgtagatgagtggcagtttatgcctaacgaaggg
cagattcagtttgctgattcgtgtattacgattgataaccgcctcactaaattgcttgag
ttcttatgtttgaacccgggtttgactcatacgcgtgatgagttaattgaagaggtttgg
aatggcagtgtattaaccgaccaagtggtcacccaagcggtatttgaactacgaaaagtt
ctgaaaacacacagtaaaaagacaagcagttatattgttaccgttccaaagcgtggctac
cgatttgatggtgaagtgaaagttgagaaagtagagctccaaaaacctgatttccaaaaa
acaactctccaaaaaaccgctctccaaaaaccagagcagcttgatgttaatgagcgccaa
tcaatgcctgaagccaaagagtttgtcaaaagagaagatcgggaagagggatatgtaaag
ccatcagaaaactctccaagaagtagaaagctgcattacatactggcgtttttggccgtt
gtcatcgttttacaatcatcatatatgtggttttctcagaataaacaaaacccttcgcaa
gcaagctcggctcactcattaagtcattatgaatttcgttatgttgtattgaatgtaacg
gaagaggttaaggcgcaaccagagctttatggaatcgtaattaagctgattgaacatatt
ggtttttatagcaatatcagagtggttaagtctgatgagcataagaagttggccgcgatt
gagtttaatatctcaacggcaaaaagcagcgacggcaagaaaactcgtttattggtgaag
tatgttaaccgagcgtcgggaggcgtgcatttaaaccgccgttattccaccaactttgct
cgtttccatgagacgtttgctgcgatgatcgatgatttattgcgtgctatgtatatcgat
gtgcctgaagaagagttaaagcgcaatatttctgtttttcctcaggataaagaatcggtc
aaggcgttgatgtctgcgaccggggtttcttacagcaccgtggattttgatatggcgctt
aagcattttcgagaggccagagcgctggctccagataacgcttatgctatttcggtgagt
tacataagtgaagtgctgacggttttctcaacagatgaggaaaatattaaacctagaatc
aaggcgttgaatgagcaatattcctcgtctttgtctgccattcttaagcgaggaaacaat
cctcgtgtttgtgaagctaacgcaatattagcgctgtctcaaagtgagcctgataaggcg
ttaaagatcttgttgtcgattccttacaatcaacatacgcctctgacttaccttttaatg
gctaaagcagaagaggcgcgtggcaacactatgggtgccaaagagttgtatttgcaagcg
acgcaaaatacttcttcaccgattgcattgacgctagccggtccgttgttctttgacagt
aatctagacaaactgattgaacaacttcagggcgtcaaactcgatgtcgacggtaaatag
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