Vibrio crassostreae: IS519_19830
Help
Entry
IS519_19830 CDS
T08776
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
vcra
Vibrio crassostreae
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcra02000
]
IS519_19830
Transporters [BR:
vcra02000
]
Other transporters
Pores ion channels [TC:
1
]
IS519_19830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OmpA
OMP_b-brl
DUF5777
Phage_OMP
Motif
Other DBs
NCBI-ProteinID:
UPR32783
LinkDB
All DBs
Position
2:complement(776995..778059)
Genome browser
AA seq
354 aa
AA seq
DB search
MKKLSKIMCAVIAASGFAAAPSIAATTYVGAKVGMGWLDSACVDNIDCEDDSVAGGIYGG
YNFTDNIALELNADYLGDYDTSFNNNGATQRYSDSIVAISLSPMYRLAIKQEFDIFFKAG
PAYIMHDDEDDVVLALGIGAEKQLSDDWALRVEYQYFDDFDDKIIQDLNSNLVTIGLSYN
FGTGNTTASAATVATAAAVTQAPAEPIAEPEAVVVEEETVVIKAQTESFSQGMFETNSTE
LSTEGKTALTPLVEVLQTYPQSSVNVVGHTDSTGAAEYNMMISKKRAAAVAAYIEEQGIE
ADRITATGEGEENPVATNDTAEGRAQNRRVDATIPSFEYQEEAQMEEVIVETAE
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattgtcaaaaatcatgtgtgctgtgatagctgcttcaggtttcgctgctgct
ccatcaattgccgcaacgacatacgtaggcgcaaaagttggcatgggttggctagatagc
gcttgtgtcgacaacattgattgtgaagatgattcagtggcgggcggtatttacggtggt
tacaactttaccgataacattgctctagaattgaatgcagattacttaggtgattatgac
accagctttaacaacaacggagcgactcaaagatacagcgattctatcgtagccatttct
ttaagcccaatgtatcgactagcgattaaacaagagtttgatatcttctttaaagcaggt
cctgcttacatcatgcacgatgacgaagacgacgttgttttggccttaggtatcggtgcc
gagaaacagctttcagacgattgggcgcttagagttgaataccaatacttcgatgatttt
gacgataagattatccaagaccttaactctaaccttgttaccattggtctaagctacaat
ttcggtacaggtaacacgacagcttcagccgcaacagtagctactgcggcagcggtaaca
caggctccagctgaaccaattgcagaacctgaagccgttgtagttgaagaagagactgtt
gtaattaaagcgcaaactgaaagcttctctcaaggcatgtttgagacaaacagtactgaa
ttgtcgacagaaggtaaaactgcactaacaccattagtagaagtactgcaaacttaccct
caatcgtcagtcaatgtcgttggtcacacggactcaacaggtgctgctgagtacaacatg
atgatctctaagaaacgtgctgccgctgtagccgcatacatcgaagagcaaggtattgaa
gcagaccgtattacggctacaggtgaaggtgaagaaaacccagtagcaacaaacgatact
gccgagggtcgtgcgcaaaaccgtcgtgttgacgcaacaatcccaagcttcgaataccaa
gaagaagcgcaaatggaagaagttatcgtagaaacggctgaataa
DBGET
integrated database retrieval system
