Vibrio crassostreae: IS519_21245
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Entry
IS519_21245 CDS
T08776
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
vcra
Vibrio crassostreae
Pathway
vcra00550
Peptidoglycan biosynthesis
vcra01100
Metabolic pathways
vcra01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IS519_21245 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IS519_21245 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vcra01011
]
IS519_21245 (mrdA)
Enzymes [BR:
vcra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
IS519_21245 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
vcra01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
IS519_21245 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
UPR31387
LinkDB
All DBs
Position
2:complement(1105264..1107162)
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AA seq
632 aa
AA seq
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MNHKRVKMRDHKIEVNLFKNRVIVAFCGILMFTLVLVGNLYRLQVENFKSYQTRADGNRI
KVLPIAPTRGLIYDRNGVLLAENKLVFDLTMIPEQTDDVDAMLAKLDKYVPRDAEQIARF
KKRYHNTRRFKSVTILENLTEEEIAKFSVHQYQFPGLSIDTSLKRFYPNGEVLTHVLGYV
AHINDSDLRKLEEQGIEANYQATTIIGKLGVERYYEDILHGTKGYQEVEVNSRGRIVRTI
EYVPPVAGKDIVLNIDLELQKYVFEQLDHRTGSAVILDPNDNSVLAMASSPSYDPNLFVD
GISSKNYQRLLNDPAHPLVNRTTLGVYPPASTVKPFMAVAGLQEHVISEDTIRNDHGVWR
IPGSKRNSKSWRDWKRWGHGPVDVTQAIEESVDSFFYQTAFDLGIDRISSWMNRFGFGEP
TGIDIYEESTANMPTREWKMMRYRTPWYQGDTVPIGIGQGYWTSTPMQLAKATSVLVNHG
KVMPPHILRATLDHGEDFSTQQLVEPEPMPSITEVPDRIWDVPINAMRLVNHGSRGSGRR
AFKGTEYTSGGKSGTAQVFDLAKDQVYNSKKLARHLLDHALYTAFAPYEHPEYVATVVIE
HGNGGSKVGAPYIRKVLDYAFEHKSGESKDHS
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgaatcataaacgcgttaagatgcgtgaccataaaatcgaagtgaacctattcaaaaac
cgcgtcatcgtcgcgttttgtgggatcttgatgttcactcttgtcttagtcggtaatcta
taccgacttcaagttgaaaattttaaaagctatcaaactcgtgccgatggcaacagaatc
aaagtattacctatcgcccctactcgtggacttatatacgaccgtaatggcgtgttgctt
gcagagaacaagctcgtctttgatctgacgatgattccagagcaaaccgatgatgtcgat
gcaatgctcgccaagctagacaaatatgtcccccgtgatgctgagcagatcgcgcgtttc
aaaaaacgctatcacaacacccgccgttttaaatctgtgactattctagagaacttaacg
gaagaagagattgctaagttctccgtgcaccagtaccagttccccggcttatctatcgat
accagcttaaagcgtttttacccgaatggtgaagtgcttacccatgttcttggttacgtg
gcgcacatcaatgatagcgatctcagaaagcttgaagagcaagggatagaagcgaattat
caagccacaacaatcataggtaagctaggtgttgaacgttactacgaagatatcttgcac
ggcacaaaaggttatcaagaagtcgaagtaaacagccgtggaagaatagtccgaactatt
gagtacgtgccgccagtagctggcaaagatatcgtgttaaatattgacctagagctgcaa
aaatacgtctttgagcaacttgatcaccgaactggaagcgcggttattctcgatccgaac
gacaacagcgtgttggcgatggcatcaagcccgagttacgaccctaacctatttgtcgac
ggtatttcgagtaagaactatcaacgcttattgaatgatcctgctcacccgttggtcaac
cgcaccactctaggtgtttatcctccggcatcaaccgttaaaccatttatggctgtggca
ggactgcaagaacatgtcatctctgaagatacgattcgtaacgaccacggcgtttggaga
attcctggctctaaacgaaactctaaatcgtggcgtgactggaaacgttggggtcacgga
cctgtcgatgtcactcaagcgattgaagagtcggtagattcattcttctatcaaactgct
tttgatttgggtattgaccgaatttcaagttggatgaaccgattcgggtttggtgaaccg
acaggcatcgatatctatgaagaaagtaccgccaacatgccgactcgagaatggaagatg
atgcgttatcgcaccccttggtatcagggtgacacagttccgattggtattggccaaggt
tattggacatccactccaatgcaacttgctaaagcaacatcagtattagttaatcatggt
aaggtgatgccccctcatatcctgagagccaccttagatcacggcgaagatttcagtaca
caacaacttgtcgaaccggagccaatgccttcaatcaccgaagtaccggatagaatttgg
gatgtgccaatcaacgcgatgcgactcgtaaaccatggcagtcgaggcagcggcagacgt
gcatttaagggaactgaatacacgagcggcggtaaatcaggaactgcgcaagtctttgat
cttgcgaaagatcaggtctacaactcgaaaaaactcgctaggcatttacttgaccacgcg
ctttacacggctttcgcaccgtatgagcaccctgaatatgtcgcaactgtggttattgaa
cacggtaacggtggttcaaaagtcggtgcgccttatatccgtaaagtactcgactatgcc
tttgaacataaaagtggtgagagtaaagatcactcctag
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