Vibrio crassostreae: IS519_21805
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Entry
IS519_21805 CDS
T08776
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
vcra
Vibrio crassostreae
Pathway
vcra00230
Purine metabolism
vcra00240
Pyrimidine metabolism
vcra01100
Metabolic pathways
vcra01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
IS519_21805 (nrdD)
00240 Pyrimidine metabolism
IS519_21805 (nrdD)
Enzymes [BR:
vcra01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
IS519_21805 (nrdD)
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Gene cluster
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Motif
Pfam:
NRDD
Gly_radical
ATP-cone
Zn_ribbon_TiaS
Zn_Tnp_IS91
DUF7129
PSV_ORF131-like_dom
Motif
Other DBs
NCBI-ProteinID:
UPR31496
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Position
2:complement(1214269..1216389)
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AA seq
706 aa
AA seq
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MKSIVIKRDGSRAPFSRDRIQAAVEAASDKADKEIAIYALNVALAVELKLEDYDEVHISE
IQTMVENELMQGPYKSLARAYIEYRHDRDIAREKQSALTREIEGLIEESNVDLINENANK
DGKVIPTQRDLLAGIVAKHYAKTHILPRDIVQAHECGDIHYHDLDYAPFFPMFNCMLIDL
KGMLTHGFKMGNAEIDTPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLEPYVMASY
EKHLSLAKEWDIHSPEAFAISRTEKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGES
WGSKLIQQSILKNRIAGLGKNRKTAVFPKLVFAIKDGLNHQKQDPNYDIKQLALECASKR
MYPDILNYDKVVEVTGSFKTPMGCRSFLNTYEENGELIHEGRNNLGVVSLNLPRIAINAK
QDMTKFYELLDEKLKLARRALETRISRLENVKARVAPILYMEGACGVRLKADDSIADIFK
NGRASVSLGYIGIHEAMTALYGTDVHLYDDGEMRAKALELVEYMKREVESWTKETGYAFS
LYGTPSENLCSRFCSIDTKEFGVIDGVTDRGYYTNSFHLDVQKKVNPYDKIDFEMPYPEI
SSGGFICYGEFPNMQKNIEALENVWDYSYTRVPYYGTNTPIDECYECGYNGEFDCTSKGF
TCPKCGNHDSTKVSVTRRVCGYLGSPDARPFNFGKQEEVKRRVKHL
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatcaatcgtaatcaagcgtgatggctcaagagctccattcagtagagatcgcatc
caagctgcagtggaagcagcatcagacaaagccgataaggaaattgctatttatgcactg
aatgtggcattagcagttgagttgaagctcgaagactacgatgaagttcatatctctgaa
attcaaaccatggtcgagaacgagctaatgcagggaccatataagtctctggctcgtgcc
tacattgaatatcgtcatgaccgtgacatcgcccgtgagaagcaaagcgctttaactcgc
gagatcgaaggtttgatcgaagaaagcaatgttgatctgatcaatgagaatgccaacaaa
gacggtaaagttatcccaactcagcgtgacttgctggcgggtatcgtggctaaacactat
gcaaaaactcacattttgccgcgtgacatcgtacaagctcacgagtgtggtgacattcac
taccacgatctagattacgcaccgttcttcccaatgtttaactgtatgcttatcgacttg
aaaggcatgttaacgcatggcttcaagatgggtaacgcggaaatcgacacacctaagtcg
atttctacggcgacagcggtaactgcgcaaatcatcgcgcaagtggcgagccacatttac
ggcggcacaacgattaaccgtatcgacgaggttctagaaccatacgtgatggcgagctac
gagaagcatttatctttagcgaaagagtgggacattcatagcccagaagcttttgctatc
tctcgtaccgagaaagagtgttacgacgcgttccaatctttggaatacgaagtaaacacg
ctacacacggctaacggtcaaacaccattcgttacgtttggttttggtctaggcgaaagc
tggggttcaaaactgattcagcaatctatcttgaaaaaccgcatcgcaggtttgggtaag
aaccgcaaaacagcggtattccctaaactggtgtttgcaatcaaagatggtttgaaccac
cagaagcaagatccaaactacgacatcaagcaattagcgcttgagtgtgcgtctaagcgt
atgtacccagacattcttaactacgacaaagtagtagaagtgacagggtcatttaaaacg
cctatgggttgccgcagcttcttgaatacttacgaagaaaacggtgagttaattcatgaa
ggccgtaacaacttaggtgttgtgagcctaaacttgccacgtattgcgattaacgcaaaa
caagatatgactaagttctatgagctgcttgatgaaaaactgaagctggctcgtcgtgcg
ttagaaactcgtatttctcgtctagaaaacgtgaaagcgcgtgttgctccaatcctatac
atggaaggtgcttgtggcgttcgcttgaaagcagacgactctattgcagacatcttcaag
aacggtcgtgcgtctgtttctcttggttacatcggtatccacgaagcaatgactgcgctt
tatggcacagacgttcacttgtacgacgacggcgaaatgcgcgctaaagcgcttgagctg
gtggagtacatgaagcgtgaagtggaatcttggacgaaagagacaggttacgcattcagc
ttatacggcacaccaagtgaaaacctatgtagccgtttctgcagcatcgacactaaagaa
tttggtgtgattgatggcgtaacagaccgtggatactacaccaacagcttccacctagat
gtgcagaagaaggtgaacccatacgacaagatcgatttcgagatgccttatccagaaatc
tctagcggtggtttcatttgttacggcgaattcccgaacatgcagaagaacatcgaagcg
ctagaaaacgtctgggattacagctacacacgtgttccttactacggcactaacacgccg
attgatgagtgttacgaatgtggttacaacggtgagttcgactgtacaagtaagggcttt
acgtgtcctaagtgtggcaaccacgactcaaccaaagtatcggtaacacgccgtgtttgt
ggttaccttggtagcccagatgcacgaccatttaacttcggtaagcaagaagaagttaaa
cgccgagtgaagcatctttag
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