KEGG   Vibrio crassostreae: IS519_23775
Entry
IS519_23775       CDS       T08776                                 
Symbol
rimK
Name
(GenBank) 30S ribosomal protein S6--L-glutamate ligase
  KO
K05844  ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
vcra  Vibrio crassostreae
Brite
KEGG Orthology (KO) [BR:vcra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vcra03009]
    IS519_23775 (rimK)
Ribosome biogenesis [BR:vcra03009]
 Prokaryotic type
  ribosomal protein modification factors
   IS519_23775 (rimK)
SSDB
Motif
Pfam: RimK Rimk_N GSH-S_ATP ATP-grasp_3 ATPgrasp_ST Dala_Dala_lig_C ATPgrasp_YheCD Synapsin_C GARS_A ATP-grasp ATP-grasp_2 CATSPERG_C R2K_3 D123
Other DBs
NCBI-ProteinID: UPR31867
LinkDB
Position
2:1687589..1688494
AA seq 301 aa
MRIAILSRNENLYSTSRLKAAGEARGHQVDVIDTLHCDIDIASNNPKIRYMGEELPQYDA
VIPRIGASITFYGTAVVRQFEMMGTFCINESVAISRSRDKLRSLQLLSRKGIGLPKTGFA
SRPDKIQDLIKNVGGAPLVIKLLEGTQGIGVVLAETNKAAESVIEAFMGLKANILVQEFI
EEANGADIRCFVVGNKVIAAMKRQAGEGEFRSNLHRGGTAQLVKLTKEERATAINAAKIM
GLNLCGVDILQSKNGPVVMEVNSSPGLEGIEKATGKDVADMIFEFIEKNAKPNANRTRGK
G
NT seq 906 nt   +upstreamnt  +downstreamnt
atgcgtatcgcaattctttctcgcaacgaaaatctatactctacttctcgcttaaaagcg
gctggagaagcacgtggtcaccaggtcgatgttatcgacacgctgcactgtgatatagat
atcgcgagtaacaatccgaagattcgctacatgggtgaagagctacctcaatacgatgct
gttattccacgtattggcgcttccattaccttttacggaactgcggttgttcgccaattc
gaaatgatgggcactttttgtatcaatgagtcagttgcaatcagtcgttctcgcgacaaa
ctgcgctcactacaactgttgtctcgcaaaggtattggcttaccaaagacaggtttcgct
agccgcccagacaagattcaagacttgatcaaaaacgtaggtggcgcgccactggttatc
aagcttcttgaaggtactcaaggtatcggtgtggttctagctgaaacaaacaaagcagca
gaaagcgttatcgaagcattcatgggcctaaaagcgaacatcttggttcaagagttcatt
gaagaagcaaatggcgcagacatccgttgttttgttgttggcaacaaagtaattgcagcg
atgaaacgtcaagctggtgagggtgaattccgctctaacctgcaccgtggcggtacagct
caactggttaaactaaccaaagaagagcgcgctacagcaatcaatgctgcgaaaatcatg
ggtttaaacctatgtggtgttgatattctacaatctaagaatggccctgttgtaatggaa
gttaactcttctcctggcctagaaggtattgagaaagcgacgggcaaagatgtagcagac
atgattttcgaattcatcgaaaaaaatgcaaaaccaaacgctaaccgtactcgtggcaaa
ggctga

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