Vespa crabro (European hornet): 124421564
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Entry
124421564 CDS
T09462
Name
(RefSeq) 5'-3' exoribonuclease 2 homolog
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
vcrb
Vespa crabro (European hornet)
Pathway
vcrb03008
Ribosome biogenesis in eukaryotes
vcrb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcrb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124421564
09123 Folding, sorting and degradation
03018 RNA degradation
124421564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcrb03021
]
124421564
03019 Messenger RNA biogenesis [BR:
vcrb03019
]
124421564
03009 Ribosome biogenesis [BR:
vcrb03009
]
124421564
03016 Transfer RNA biogenesis [BR:
vcrb03016
]
124421564
Transcription machinery [BR:
vcrb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
124421564
Messenger RNA biogenesis [BR:
vcrb03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
124421564
Ribosome biogenesis [BR:
vcrb03009
]
Eukaryotic type
Pre-60S particles
RNases
124421564
Transfer RNA biogenesis [BR:
vcrb03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
124421564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
124421564
NCBI-ProteinID:
XP_046812841
LinkDB
All DBs
Position
2:complement(14523589..14548548)
Genome browser
AA seq
963 aa
AA seq
DB search
MGVPAFFRWLSRKYPSMIVECIEQKPINSNGVHVPVNSADPNPNGIEFDNLYLDMNGIIH
PCTHPVDQPAPKNEEEMMEAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
ASKETSEKLNEIQRVRSELALKGAVLPPEKPKEEHFDSNCITPGTPFMARLSKCLHYYIH
DRLNNDPGWRDIKVILSDANVPGEGEHKIMDFIRRQRAQPNHNPNTQHVLCGADADLIML
GLATHEPNFTIIREEFKPNKPKPCDICGQLGHEMQECTGAEPNQKEEDNAFSAECQYIFV
RLNVLREYLERELQMPNLPFKYDFERAIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLV
NLYKKAVYKTGGFLTDSGDINLDRVQVIMSELGDVEDEIFKKRQQNELAFKQREKDKKKR
LKTLSNYKPKWIPTGQFAPMPLGQTVKPVENARHEAYQMRMQNQNYTTCSIMQSEHASVG
TNVTALESMLRPEGKNELNKRKIDEVSADDTDDDDRAHDEVRLWEDGFKDRYYESKFDVS
PDNLAFRNNVALQYVRGLCWVLRYYYQGCASWKWYFPYHYAPFASDFINIGGLSTEFEKD
TVPFRPLEQLMGVFPAASSIHVPQSWAKLMSDPKSPIIDFYPEDFKIDLNGKKFAWQGVA
LLPFVDEKRLFKALEPYYDSLTDAEKKRNVRDDDRLYVGLGNSGYNFVKGLYMNGVGFEI
ETPVRIDGMRGMVLLAEDCIGDGATLLSPINGLPVRNNKVYCVRFRDPKYNSSFIFSTKK
LKGAIEPPRVLKPQDFEQMNRNNGNQWKPQIGFTPSTRFASLSEAGHRMLDHHTGFNRAL
PMYGHVPPPPSVYQHQQQYQQHHGYHSGYQSRSGGYNTASSSGSSSLSSGPWASGYGPAP
QYLQHRSIEYRQQQRHPYSHQQHQARNGNNYQSSQKNYHGYQQRNGNSDRYGGGSGGSSG
WRR
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtcccggcgtttttccgatggttaagtcgaaaatatccttccatgatagtggag
tgtatagaacaaaagccaataaactctaatggagtacatgttcctgttaattctgcagat
ccaaatccaaatgggattgaatttgataatttatatttggatatgaatggaatcattcat
ccatgtacccatccagtagatcaacctgcaccaaagaatgaggaagaaatgatggaggct
atttttgaatgtattgaccgcttgtttcgtattgtaagacccaggaagttactttacatg
gctatagatggagttgcacctagggctaaaatgaatcagcaaagatcacgtcgtttccgt
gcatctaaagaaacaagcgaaaaacttaatgaaattcaaagggtacgctctgaattagct
ttaaaaggagccgtattaccaccagaaaagccaaaagaagagcactttgatagcaactgc
attactccaggcactccatttatggcaagattatcaaaatgtttacattattatatacac
gatcgtttgaataatgatcctggttggagggacataaaagtaatactgagcgatgcaaat
gttccaggagaaggagaacacaaaataatggattttattagaagacaaagagctcaaccc
aatcataatcctaatacacagcatgttttgtgtggtgctgatgctgatttaattatgttg
ggtcttgccacacatgaacccaattttactattattcgtgaagaatttaaaccgaataaa
ccaaaaccatgtgatatatgtggtcaattaggacatgaaatgcaagaatgtactggcgca
gaacctaatcaaaaagaagaagacaatgcattttccgcagaatgtcaatatatatttgtg
cgattaaatgttttaagagaatatttagagagagaattgcaaatgcccaatctaccgttt
aaatatgattttgaacgtgctatagacgattgggtttttatgtgtttttttgtaggaaat
gattttctacctcatcttccgtcgttggaaattagagaaggagctattgataggcttgta
aatttgtacaaaaaagctgtgtataaaacaggaggtttcttaacggatagtggtgacatt
aatttggatagagtgcaggtgataatgtctgaacttggtgatgtagaggatgaaattttt
aaaaaaaggcaacagaatgaattggcttttaaacaacgtgagaaggataagaaaaaaaga
ttaaaaacacttagcaattataaaccaaaatggattcctacaggacaatttgcacctatg
ccattaggacaaaccgttaaaccagttgaaaatgcacgccatgaagcttatcaaatgcgc
atgcaaaatcagaattataccacttgttcgattatgcaatcggaacatgcatcggtgggt
acaaatgtaactgcactcgagagtatgctgcgtcctgagggtaaaaatgagttaaacaaa
cgcaaaatcgacgaagtatcagcggatgatactgacgatgacgatcgagcacatgatgaa
gttagactttgggaagatggttttaaagatcgttattatgagtcaaagtttgacgtatct
cccgacaatctcgcatttagaaacaatgtggccttacaatatgtacgtggtttatgttgg
gttttacgttattattatcaaggttgcgcttcatggaaatggtattttccatatcattac
gcaccttttgcaagtgattttattaatataggtggtctttctacagaatttgagaaagat
accgtaccatttcgtcctttagaacagctgatgggtgtatttccagcagctagtagtata
catgtgccacaatcatgggcaaaattaatgagtgatccaaaatctccgatcatagatttt
tatccagaagacttcaagatagatcttaatggcaaaaagtttgcttggcaaggcgtagct
ttgcttccctttgttgatgaaaaaagactgttcaaggctttagagccttattacgacagc
ttaacggacgcagaaaaaaaacgaaatgtacgtgatgacgatcgattgtatgtcggtttg
ggaaatagtggatataattttgtaaaaggtctttatatgaatggagtgggatttgaaatt
gaaacaccagtacgtatagatggtatgagaggtatggtgttgttggcagaggattgtatt
ggagatggagctacattactttctccaatcaatggattaccagtgaggaataataaagta
tattgtgtacgtttccgggatccaaagtacaatagtagttttatcttttctacaaaaaaa
ttgaaaggtgctatagaaccaccaagagtgttgaaacctcaagactttgaacaaatgaat
cgtaacaatggtaatcaatggaagccacagatcggctttactccttcgacacgatttgca
tctttaagcgaagctggtcatcgaatgctcgatcatcacacgggttttaatagagcacta
ccgatgtatggacacgtaccaccacctccgagtgtttatcaacatcaacagcaatatcaa
cagcatcacggatatcatagtggatatcaatcgagatcgggaggatataacaccgctagt
tcaagtggatcctcctcgttatcgtcggggccatgggctagtggctatggtccggcacct
cagtatcttcaacaccgatccatagaatatcgtcagcaacaaagacatccttactcacac
cagcaacatcaagcccgaaatggaaacaattatcaatcttctcagaaaaattatcatggt
tatcaacaaaggaatggcaattctgatcgatatggaggtggtagcggaggaagtagtggg
tggagacgataa
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