Vespa crabro (European hornet): 124421632
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Entry
124421632 CDS
T09462
Name
(RefSeq) CDK5RAP1-like protein
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
vcrb
Vespa crabro (European hornet)
Brite
KEGG Orthology (KO) [BR:
vcrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcrb03016
]
124421632
Enzymes [BR:
vcrb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
124421632
Transfer RNA biogenesis [BR:
vcrb03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
124421632
Prokaryotic type
Methylthiotransferases
124421632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Motif
Other DBs
NCBI-GeneID:
124421632
NCBI-ProteinID:
XP_046812988
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All DBs
Position
2:complement(5544278..5546857)
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AA seq
604 aa
AA seq
DB search
MIKMKGIINLCYVSSRQCLNKYARLWKIINIHDIYNCRTLNTTVFLNSTVSNVDNFSDNK
KEKRTYLPKDGLSLRDFLIKNNEHDNNVSNIPTVENIPYIQNVHGQNQKVYFDVHGCAMN
VNDTEIIWSILKSHGYQFTNNMKNADIVLLVTCAIRDGAEQKIWNKLFHLSHMKRKRIGK
VPLKIGLLGCMAERLKHKILEKEHAIDVIAGPDSYKDLPRLLAKTDKETAINVLLSLDET
YADILPVRLDSNSVSAFVSIMRGCDNMCTYCIVPFTRGRERSRPIDSIINEIQHLSDEGI
KEVILLGQNVNSYRDLSQSDFYTPSNVETNLVKGFKTVYKTKKGGLRFSDLLDKVSLINP
EMRIRFTSPHPKDFPNEVLELIAERPNISKQIHLPAQSGNSAVLERMRRGYTREAYIDLV
NHIRDILPEVALSSDFIAGFCGETEEEFQDTLSLIKLVKYNTAFLFAYSMREKTTAYHRY
KDDVEANVKSDRLQRMIALYRKETEKLNGIYIGQKQLVLVEGVSRKCDQKLQGRNDNNIR
VLLPCATIPISEHSTTKRKIEAGDYVVVKIYKSNSMTLMGDPLYHSSISEFTSDTERTKH
RYIL
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaatgaaagggattattaatctatgttatgtctcatcaagacaatgtctaaat
aaatatgcacgattatggaaaatcatcaatattcatgacatttataattgtcgtacatta
aatactactgtatttctaaattcgacagtatctaatgtcgataatttcagtgataataaa
aaagaaaaaagaacatatttacccaaagatggattgtcccttcgagactttttgataaaa
aacaatgaacacgataacaatgtttccaatattcctaccgttgaaaatattccatacatt
cagaatgtacatggtcaaaatcaaaaagtatattttgatgttcatggctgtgcaatgaat
gtcaatgatacagagataatatggtctatattaaaaagtcatggttatcaatttacgaat
aatatgaaaaatgctgatattgtgcttttagttacttgcgctattagagatggtgcggaa
caaaaaatatggaataagttatttcatttaagtcatatgaaacgaaaaaggataggaaaa
gttcctttaaaaattggattattaggatgtatggcggaacgtttgaagcataaaatatta
gaaaaagaacatgcaatagatgtgattgctggtcctgatagttacaaggatttaccaaga
cttctggcaaaaaccgataaagaaactgctattaacgttttattatcgcttgatgagact
tatgcagatatcttacctgttaggcttgattcaaattctgtcagtgcatttgtttccatt
atgcgaggatgtgacaatatgtgtacatactgtatagtaccatttacaaggggtagagaa
agatcaagacctattgatagtattattaatgaaattcaacatttatcggatgagggtata
aaggaagttattcttttaggacaaaatgtaaatagttatagagatttatctcaatcagat
ttttatacaccttcaaacgtagaaactaatcttgttaaaggatttaaaacagtatataaa
actaaaaagggtgggttaagattcagtgatctcttagataaggtatctctaattaatcca
gaaatgagaataagatttacgtcacctcatccaaaagattttcccaacgaagtactcgaa
ttaatagcagaaaggccaaatatttctaagcagattcatttacctgcacaaagtggtaat
tccgctgtattagaaagaatgagacgtggatatacaagagaggcatatattgatcttgta
aatcacatacgtgatatattaccggaagtcgcgttatccagtgattttattgctggtttt
tgtggggagacagaggaagaatttcaggatactttatcattgatcaaattagtcaaatat
aatactgcctttctattcgcgtatagtatgagagagaaaacgacagcatatcatcgatac
aaagatgacgttgaagcaaacgttaaatcagatagactccaaagaatgatagcattgtat
agaaaagagacagaaaagttgaatggtatatacataggtcaaaaacagcttgtactcgtg
gaaggtgtgagcaggaagtgtgatcagaaacttcaaggaagaaatgataacaatataaga
gttttacttccttgtgccactatacctatcagtgaacattcaactactaaaagaaaaata
gaagctggtgattatgtagtcgtgaaaatttacaaatctaattcaatgacattaatggga
gatcctctttatcactcttccatctctgagtttacttctgatactgaaagaacgaagcat
cggtatattctttaa
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