Vespa crabro (European hornet): 124422320
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Entry
124422320 CDS
T09462
Name
(RefSeq) ATP-dependent RNA helicase Ddx1 isoform X1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
vcrb
Vespa crabro (European hornet)
Brite
KEGG Orthology (KO) [BR:
vcrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcrb03041
]
124422320
03016 Transfer RNA biogenesis [BR:
vcrb03016
]
124422320
Enzymes [BR:
vcrb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124422320
Spliceosome [BR:
vcrb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
124422320
Transfer RNA biogenesis [BR:
vcrb03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
124422320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
PGK
Motif
Other DBs
NCBI-GeneID:
124422320
NCBI-ProteinID:
XP_046814576
LinkDB
All DBs
Position
2:13092822..13096372
Genome browser
AA seq
730 aa
AA seq
DB search
MAAFEEMGVLSEIAQAVEEIDWMLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPI
LQIVWETLKDMETGKINNSTKELSHSIHWGLSLFDRDHALAVTPDSLRCQSREPKEWHGC
RANKGVQGDGKFFFECIPTDEGLCRVGWSTSQASLDLGTDRFGYGFGGTGKKSNAKQFDN
YGEPFGMHCIIGCLLDLSNGIIRFTKNGVDLGVAFTLNPQQKSQIFFPAVVLKNAEMSFN
FGAQPFKYPPPNDYIAISSAPKDYVRLNPINSSHSQSVGSNKPINNAPQAIIIEPSRELA
EQTYNQIQKFKTHLNNPTVRELLVIGGVSVKEQISMLNSGVDIVVGTPGRLEDLIQGGYM
SLTHCRFFVLDEADGLLKQGYTELIDRLHRQIPKITSDGKRLQMIVCSATLHSFEVKKMA
ERLMHFPTWVDLKGEDTVPETVHHVVVIVDPQKDKLWQNLRRNIETDGVHSRDNIKPGNN
TAEVLSEAVKILKGEYCIRAIREHKMDRALLFCRTKLDCDNLERYLKQVGGSELSCVCLH
GDRKPQERKANLEKFKKKEVKFLICTDVAARGLDITGLPFMINITLPDEKSNYVHRIGRV
GRAERMGLAISLVSNVPEKVWYHGEWCHSRGRNCHNTNLTDQGGCCTWYNEPRYLADIED
HLNVTIEQVGSDIKIPINEFDGKVSYGEKRAAMGTNYENHVHQMAPIVAELTALESKAQL
IYLNRHLIVY
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgtttgaagaaatgggtgtactgtctgaaatagcacaagctgttgaagaaata
gattggatgctaccgacagatgtgcaggcagaggctattcctttaattttgggtggaggt
gatgtattaatggctgcagaaactggaagtggaaaaactggagcattttgtttaccaatt
ttgcaaattgtatgggaaacattaaaagatatggaaactggaaaaattaacaactctaca
aaagaattatcacattctatacattggggattgagtctatttgatagagatcatgctctg
gctgtgacaccagatagtttaagatgtcagagtcgtgagccaaaggaatggcatggatgc
cgtgccaataaaggagtacaaggagatgggaaatttttttttgaatgcatacccacagat
gagggtttatgtcgcgtggggtggtctacgtctcaggcttctttagatttaggaacagat
agatttggctatggctttggaggtactggtaagaagtccaatgcaaagcaatttgataat
tatggtgaaccttttggaatgcattgtataattggatgtttacttgatttatcaaacggc
ataataagattcacaaaaaatggtgtagatctgggtgtagcttttacattgaatccccaa
cagaaatcgcaaatttttttcccagctgttgtactgaaaaatgcagaaatgtcatttaat
tttggtgctcaaccatttaagtatcctccaccaaatgattatattgctatatcttcagct
ccaaaagattatgtgagacttaatcctattaacagtagccatagtcaaagcgtaggaagt
aataaacctataaacaatgcaccacaggctataattattgaaccttctcgggaattagct
gaacaaacctataaccagatacaaaaatttaaaacacatttaaacaatcctacagttcga
gaattattagttattggaggagtaagcgtaaaggaacagatttcaatgttaaattcaggt
gttgatatagtagttggcacacctggtcgtttggaagatctaatacaaggaggatacatg
tcattgacacattgcagattttttgtattggacgaagctgatggattattaaagcaagga
tatacagaacttattgatcgtctacatagacaaattcctaagattacatcagatggaaaa
agattgcagatgattgtatgttcagcaactttacattcatttgaagtaaaaaagatggct
gaacgtttaatgcattttccaacgtgggttgatttaaagggagaagatacagttcctgaa
actgttcatcatgtcgtagtaatagtagatccccagaaagacaaattatggcaaaactta
agaagaaatattgaaacagatggagtgcatagtagagataatataaaacctggaaataac
acagctgaagtattgtcagaggctgttaaaatattaaaaggagagtactgtattcgtgct
ataagggaacataagatggatagagcattacttttttgcagaacaaaacttgactgtgat
aatttggaacgttatttgaagcaagtaggaggaagtgaactttcatgtgtttgtttgcat
ggtgatagaaaaccacaagaacgtaaagcgaatttagagaaattcaaaaaaaaagaagta
aagttcttaatttgcacagatgtagcagcaagaggtctagatataaccggtttgccgttc
atgatcaatattactttgcccgatgaaaaatcaaattacgtgcacagaattggaagagtc
ggtagagctgaacgaatgggtttggctatttctttagttagcaatgtaccagagaaagta
tggtatcatggtgaatggtgtcattctcgcggtagaaattgtcataatactaatcttact
gatcaaggtggatgttgtacttggtataatgaacctagatatctggcagacattgaagat
catttgaatgtaacaattgaacaagttggctcagatataaagattccaataaatgaattt
gatgggaaagttagttatggagaaaaaagagcagctatgggaaccaattatgaaaatcac
gtacatcaaatggcacccatcgttgctgaattgactgcactagaatcaaaagcacaactg
atatatctaaatagacatctaatagtatactaa
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