Vespa crabro (European hornet): 124422590
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Entry
124422590 CDS
T09462
Name
(RefSeq) transcription elongation factor SPT6-like isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
vcrb
Vespa crabro (European hornet)
Brite
KEGG Orthology (KO) [BR:
vcrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcrb03021
]
124422590
03036 Chromosome and associated proteins [BR:
vcrb03036
]
124422590
Transcription machinery [BR:
vcrb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
124422590
Chromosome and associated proteins [BR:
vcrb03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
124422590
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
SH2
Tex_central_region
HHH_9
HHH_3
Tex_YqgF
Spt6_S1
S1_RRP5
HTH_10
OB_RRP5_4th
Tex_N
Motif
Other DBs
NCBI-GeneID:
124422590
NCBI-ProteinID:
XP_046815211
LinkDB
All DBs
Position
3:9274767..9283916
Genome browser
AA seq
1759 aa
AA seq
DB search
MADFLDSEAEESEEEEELDQNEKKKLKKIKAVEESDEEDDDDGEEVADLIDDNPIEEESD
VEDSDTSGGTKKRKKSDDEDFDDRLEEEDYDLIEENLGVKLERKRRFKRLRRIQDEESED
EQEKEPEEERDAIATELFEGSGDERDIFVEEERRSERSHRPEVETLDEEGSEGDDDMNDF
IVDEDGRSLAEKRMKKKPIFSDAALQEAQDIFGVDFDFDEFGKFGEEDYEEEEEEEEEDE
YLDDDVDERPRRPKKQFKKKSTRKSIFEIYEPSELKRGHFTDLDNEIRNTDIPERMQLRS
IPVTLVVEGSDELDLEAEWIYKQAFCRPTISVQDAHLNEEAKERAKKGPQTIGKIKKALD
FMRNQHFEVPFISFYRKEYVLPELNINDLWKVYKFDAKWCQLRQRKENLLKLFKKMRNYQ
LDEIMKNPDAPLPDNVRIIKDDDIERLKNIQTSEELNDVYQHFMLYYSHEIPAMQEVVRQ
KERETRREARIQKRKQQIAEAEENGENPPEEDIEVAEEEEEPDETLKQAVRSGPYSTCRK
AGLDPLAKKFGLTPEHFAENLRDNYQRHEVDQEPTEPITVANDFCSSRFKTSDEVLKAAQ
LMVAMQLAREPLVRKCVREMYMERAKVSIRPTKKGIKEIDENHPIYSMKYLKDKPVRDLV
GDQFLKLIIAETDKLINISLSDTIEGNTTSNYVDEMKQLYYRDEFSKNVQDWNALRVGSV
EMALNRMVIPHLKKELRTNLVAEAKECVMRACCRKMYNWIKVAPYTCEFPEEEDEEWDTS
KGLRVMGLAYVPDYSQAAFTCIVSADGECTDYVRLPHLLKRKNSFREDEKVMKEADLITL
KNFIATKKPHVVVIGGESREALMIVSDIKECISNLMEDEQFPSIQVEICENELAKIYSNS
NKGVSEFRDYPELLRQAISLARRMQDPLVEFSQLCTADEEILCLKYHSLQDQLLKEELLE
NLYLEFVNRVNEVGVDVNKAVQQAYSGNLVQFICGLGPRKGQALIKILKQTNQRLENRTQ
LVTACHMGPKVFINCAGFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAVDALEY
DDEDANPAGALEEILESPERLKDLDLDAFAEELERQGFGNKCVTLYDIRAELNSRYKDLR
LLYQSPSPEKLFDILTKETPETFYIGKLVLATVVGISHRKPQGEQLDQANPVRNDETGLW
QCPFCLKNDFPELSEVWNHFDAGACPGKATGVRLRLDNGISGYIHIKNLSDKHVANPEER
VSIGQVIHCRIIKIEVERFSVECTSKSSDLADKNHEWRPQRDIYYDTETHDKDVKIEEDA
KKVKQRQTYVKRVIIHPSFHNISFAESEKLMQNMKQGEGIIRPSSKGADHLTVTWKVTDN
IYQHIDVREEGKENAFSLGHSLWIGNEEFEDLDEIIARHVNPMAAYASELLDFKYYKTNV
EGVKDKAEEILKEQKKQNPGGIPYIISAAKNYPGKFLLSYLPRVRCRHEYVSVSPDGFKF
RGQMFSRVNDLFRWFKEHFRDPIPGQSTPGTPHGALTSRTPYHTTPGAVTGMNQDAIQRV
AQNLPHHMLHSLSQVANQTPHHYPPHTPGAASTTAYGGMHTYPNTPYTPSGQTPFMTPYQ
TPHTPHHAQQTPNHHQGPFLHPVSSSIPSVTQRSMRSHRPIPSMSTPSSGDTMDWSKAAE
AWARLKQSTPRGSGSTPRYEESRKTPRNYEDSAGRTTPRNRTPSNRTPSYKSPRGTPFTN
SSPRSMSLSGDGTPLYDES
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
atggcagactttttagattctgaagcggaagaaagcgaggaggaagaggaacttgatcaa
aatgagaaaaagaagttgaaaaaaataaaggcagtcgaagaaagtgacgaagaagatgat
gatgatggagaagaagtagcagacttgattgatgataatccaatagaagaagagagtgat
gttgaggacagtgatacttccggtggtacaaaaaagagaaaaaagagcgacgatgaagat
tttgatgatcgactggaggaagaagattatgatttgatagaagaaaatttaggtgtcaaa
cttgaaagaaaacgcagatttaaacgtctaagaagaatacaagatgaagaatcagaagat
gaacaggaaaaggaaccagaagaagaacgagatgctattgctactgagctatttgaaggc
tctggtgatgaaagggatattttcgtggaggaagaacgacgaagtgaacgtagtcataga
ccagaagtggagactcttgatgaagaaggaagtgaaggagatgatgacatgaatgatttt
attgtcgatgaggatggaagatctttagcagaaaaacgtatgaaaaagaaacctatattc
tcagatgctgcactacaagaagcacaagatatttttggggtagattttgattttgatgag
tttggtaaatttggagaagaagattatgaagaagaagaagaagaagaagaagaagatgaa
tatttggatgatgatgttgatgaaagaccaagaagaccaaagaaacaatttaaaaagaaa
agcacaaggaaaagtatttttgaaatatatgagccaagtgagctgaagagaggtcatttt
acagacttagataatgagattcgcaatacagatattcctgaaagaatgcaacttcgttct
attcctgttacacttgtagttgaaggttctgatgaattagatcttgaggctgaatggata
tataaacaagctttttgtcgacctaccatttccgttcaagatgctcatttaaatgaagaa
gccaaagaaagagccaaaaaaggcccacaaactattggaaaaattaaaaaagctttagat
tttatgcgcaatcaacattttgaagtccctttcatttcattttatagaaaagaatatgtg
cttccagaactaaatatcaatgatttatggaaagtatacaaatttgatgccaaatggtgt
caattgcgtcaacgaaaagaaaatttattaaaattatttaagaaaatgagaaattatcag
ttagatgaaattatgaaaaaccctgatgctccattacctgataatgtgagaataataaaa
gatgatgacattgaacgtcttaaaaatattcagacaagcgaagagttaaatgatgtttat
caacattttatgctttattatagtcatgagataccagctatgcaagaagttgtacgccag
aaagaaagagaaacgcgtcgtgaagccagaatacaaaaaagaaaacaacaaattgctgaa
gcagaagagaatggtgaaaatcctccagaagaagacatagaagtagcagaagaagaagaa
gaaccagatgaaaccttaaaacaagcagtgaggagtggaccttattccacatgtagaaaa
gcaggcttagatccacttgccaaaaagtttggtcttactcctgaacattttgcagaaaat
ttgcgtgataattatcaacgtcacgaagtggatcaagaacctacagaacctattacagtt
gcaaatgatttttgtagttcaagatttaaaacttcagatgaagttctcaaagctgcgcaa
ttaatggttgcaatgcagttggcacgcgagccattagtacgcaaatgtgtcagagaaatg
tatatggaaagagcaaaagtatcaataagacctacaaagaaaggtattaaagaaatagat
gagaatcatcctatatactccatgaaatatcttaaagacaaaccagtgcgagatcttgta
ggagatcagtttttaaaattgattatagctgaaacagataagcttattaatatttcgctg
agtgacacaatagaaggaaatacaacaagcaattatgttgatgaaatgaagcagctttat
tatagagatgaattcagcaaaaatgttcaagattggaatgctttaagagttggcagtgta
gaaatggcactcaatcgtatggtaataccacatttgaaaaaggaattgagaacaaatctt
gttgcagaagcaaaagaatgtgtaatgagagcatgttgtcgtaaaatgtataattggatt
aaagtagctccatatacttgtgaattccctgaagaagaagatgaagaatgggacacaagt
aaaggtcttcgagtgatgggtttagcttatgtacctgattattctcaagctgcttttaca
tgcatagtttctgctgacggtgaatgtacagattatgtaagattaccacatttgttgaaa
agaaaaaatagttttagagaagatgaaaaagtcatgaaagaagctgatttaattacactt
aaaaattttattgcaacaaaaaaacctcatgtggttgtcataggtggtgaatcaagggaa
gcgttaatgatagtatctgatataaaggaatgtatttcgaatctaatggaagatgaacaa
tttcccagtatccaagttgagatttgtgaaaatgaacttgctaaaatttattccaatagt
aacaaaggtgtatctgaatttagagattatccagaattgttacgacaagctatatcttta
gcgagaagaatgcaggatcctttagtagaattttctcaattatgtactgcagatgaagaa
atattatgcctcaaatatcattcattgcaagatcagcttcttaaggaagaacttctagaa
aatttgtatttagaatttgtgaatagggtaaatgaagttggtgttgatgttaataaagca
gtacaacaagcttattctggaaatctagttcagtttatatgtggcttgggccctagaaaa
gggcaagcattgattaaaatattgaaacaaactaatcaaagattggaaaatagaacacaa
cttgtaacagcctgtcatatgggacctaaagtatttatcaattgtgctggctttataaaa
attgatacaaatagtttgggggatagtacagaagcgtacgtagaagtactagatggttca
agagtgcatcctgaaacatatgaatgggcaagaaaaatggcagtagatgctttggaatat
gatgatgaggatgcaaatccggcaggtgctctagaagaaattctagaatcaccagaaaga
ttgaaagatttagacttggatgcatttgcagaagaattagaaaggcaaggttttggcaat
aaatgtgttacattatatgacattagggctgaattgaactctagatataaagatttacgt
ttattataccaatctccaagtccagaaaaattgtttgatatattaactaaagaaacacct
gaaacattctacataggtaaattggtattagcaacagtagttggtataagtcatagaaaa
ccacaaggagaacaattggatcaagcaaatccagtcagaaatgatgaaactggtttatgg
cagtgtccattctgtcttaaaaatgattttcctgagctttcagaagtatggaatcatttt
gatgcaggagcttgtccaggaaaggctacaggtgtaagattaagattagacaatggaata
tctggctatattcatattaaaaatttatctgataaacatgttgctaatcctgaagaaaga
gtaagcataggccaagtaattcactgccgtattatcaaaatcgaagtagaacgttttagt
gtggaatgtacgagcaaaagcagcgatctcgcagacaaaaatcatgaatggaggccacag
agagacatttattatgatacagagacgcacgataaagatgtaaaaatagaagaggatgct
aagaaagtaaagcagcggcaaacatatgtaaagcgtgttattatacatccgtcttttcac
aatattagttttgcggaatcggagaagttaatgcaaaatatgaaacaaggagaaggcata
ataagaccaagcagtaaaggtgctgatcacttgactgtgacgtggaaagtaacagataat
atttatcaacacattgatgtaagagaagaaggcaaagaaaacgcattttccttgggacat
agtttgtggataggcaatgaagaatttgaagatctagatgaaataattgctagacacgtc
aatccaatggctgcatatgcttcagaattattagattttaaatattacaaaacaaacgtc
gaaggtgtaaaagataaagccgaagagatattaaaagaacaaaagaaacaaaatccgggt
ggaattccatatattatatctgcagctaaaaattatccaggaaaattcctcctttcatat
ttacctagagttcgatgccgtcatgaatacgttagcgtttcaccagatggttttaaattt
agaggacaaatgtttagtagagtaaatgatttattccgttggttcaaagaacattttaga
gatccaatacctggccaatcaacaccaggcactccacatggtgctttaacttccagaaca
ccgtatcatactacacctggagcagttacaggaatgaatcaagatgcaatacaaagagtg
gcacaaaatttaccacatcacatgttgcattccctatcacaagtagcaaatcagacacca
catcattacccaccacatactccaggtgcagcaagtaccacagcttatggcggaatgcat
acgtatccaaatacaccttatactccttccggacaaactccatttatgacaccataccaa
acacctcatactccacaccatgcacaacagacaccaaatcatcatcagggcccattttta
cacccagtatcatcatcgataccatctgtaactcagagatcaatgcgatctcacagacct
attccatccatgtctacaccctcatctggggataccatggattggagtaaagcagcagaa
gcatgggctcgtttgaaacaatccactccacgaggatctggtagcactccaagatatgag
gaatccagaaaaacaccacgaaattatgaagattccgctggaagaacaactccaagaaat
agaactccgtctaatcgtacgccatcctataaatcgccacgaggcacaccatttacgaat
tctagtccacgaagtatgtctcttagtggagatggtactcctttatatgacgaaagttaa
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integrated database retrieval system
