Vespa crabro (European hornet): 124422738
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Entry
124422738 CDS
T09462
Name
(RefSeq) transcription elongation factor SPT6-like isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
vcrb
Vespa crabro (European hornet)
Brite
KEGG Orthology (KO) [BR:
vcrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcrb03021
]
124422738
03036 Chromosome and associated proteins [BR:
vcrb03036
]
124422738
Transcription machinery [BR:
vcrb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
124422738
Chromosome and associated proteins [BR:
vcrb03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
124422738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
SH2
HHH_3
HHH_9
Tex_YqgF
Spt6_S1
HTH_10
S1_RRP5
OB_RRP5_4th
Tex_N
Motif
Other DBs
NCBI-GeneID:
124422738
NCBI-ProteinID:
XP_046815548
LinkDB
All DBs
Position
3:complement(5589278..5596593)
Genome browser
AA seq
1758 aa
AA seq
DB search
MADFLDSEAEESEEEEELDQNEKKKLKKIKAVEESDEEDEDDEEEVQDLIDDNPIEEESD
AEDSDTSGGTKKRKKSDDEDFDDRLEEEDYDLIEENLGVKLERKRRFKRLRRIQDEESED
EQEKEPEEERDAIATELFEGSGDERDVFMEEERRSERSHRPEVETLDEEGSEGDDDMNDF
IVDEDGRSLAEKRMKKKPIFSDAALQEAQDIFGVDFDFDEFGKFGEEDYEEEEEEEEEDE
YLDDDVDERPRRPKKQFKKKSTRKSIFEIYEPSELKRGHFTDLDNEIRNTDIPERMQLRS
VPFTPVAEGSDELDLEAEWIYKQAFCRPTISVQDAHLNEEAKERAKKGPQTIGKIKKALD
FMCNQNFEVPFISFYRKEYVLPELNINDLWKVYKFDAKWCQLRQRKENLLKLFKKMRNYQ
LDEIMKNPDAPLPDNVRVIKDDDIERLKNIQTSEELNDVYQHFMLYYSHEIPAMQEVVRQ
KEREARREARIQKRKQQIAEAEENGENPPEEDIEAAEEEEEPDETLKQAVRSGPYSTCRK
AGLDALAKKFGLTPEHFAENLRDNYQRHEVDQEPTEPITVANDFCSLRFKTPDEILKAAQ
LMVAMQLAREPLVRKCVREMYMERAKISIRPTKKGIKEIDENHPIYSMKYLKDKPVRDLV
GDQFLKLIIAETDKLITISLSDTIEGNTTSNYVDEMKQLYYRDEFSKNVQDWNALRVGSV
EMALNRMVIPLLKKELRTNLVIEAKECVMRACCRKMYNWIKVAPYTCEFPEEEDEEWDTS
KGLRVMGLAYVPDYSQAAFTCIISADGECTDYVRLPHLLKRKNSFREDEKVMKEADLLAL
KNFIATKKPHVVVIGGESREALMIASDVKECISNLMEDEQFPGIQVEICENELAKIYSNS
NKGISEFRDYPELLRQAISLARRMQDPLVEFSQLCTADEEILCLKYHPLQDQLLKEELLE
NLYLEFVNRVNEVGVDVNKAVQQAYSGNLVQFICGLGPRKGQALIKILKQTNQRLENRTQ
LVTACHMGPKVFINCAGFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAVDALEY
DDEDANPAGALEEILESPERLKDLDLDAFAEELERQGFGNKCVTLYDIRAELNSRYKDLR
ILYQSPSPEKLFDILTKETPETFYIGKLVLATVVGISHRKPQGEQLDQANPVRNDETGLW
QCPFCLKNDFPELSEVWNHFDAGACPGKATGVRLRLDNGISGYIHIKNLSDKHVANPEER
VSIGQVIHCRIIKIEVERFSVECTSKSSDLADKNHEWRPQRDLYYDTETHDQDVKIEEDA
KKVKQRQTYVKRVIIHPSFHNISFAESEKLMQNMKQGEGIIRPSSKGADHLTVTWKVTDN
IYQHIDVREEGKENAFSLGHSLWIGNEEFEDLDEIIARHVNPMAAYASELLDFKYYKANV
EGVKDKAEEILKEQKKQNPGGIPYIISAAKNYPGKFLLSYLPRIRCRHEYVSVSPDGFKF
RGQMFSRVNDLFRWFKEHFRDPIPGQSTPGTPHGALTSRTPYHTTPGAVTGMNQDAIQRV
AQNLPHHMLHSLSQVANQTPHHYPPHTPGAASTTAYGGIHTYPNTPYTPSGQTPFMTPYQ
TPHHTPHHAQQTSNHHQGQFLHPVSSSIPSVTQRSMRSHRPTPSMSTPSSGDAMDWSKAA
EAWARLKQSTPRGSTPRYEESRKTPKNYDDSTGRTTPRNRTPSNRTPSYKSPRGTPFTNS
SPRSMSLSGDGTPLYDES
NT seq
5277 nt
NT seq
+upstream
nt +downstream
nt
atggcagactttttagattctgaagcggaagaaagcgaggaggaggaggaacttgatcaa
aatgagaaaaagaagctcaaaaaaataaaagctgtcgaagaaagtgacgaagaagatgaa
gatgacgaagaagaagtccaagacttgattgatgataatccaatagaagaagaaagtgat
gcagaggacagtgatacttctggtggtacaaaaaagagaaaaaagagtgatgatgaagat
tttgatgatcgactggaggaagaagattatgatttgatagaagaaaacttgggtgtcaaa
cttgaaagaaaacgcagatttaaacgtctaagaagaatacaagatgaagaatcagaagat
gaacaggaaaaggaaccagaagaagagcgagatgctattgcaactgagttatttgaaggc
tctggtgatgaaagggatgtctttatggaagaagaacgacgaagtgaacgtagtcataga
ccagaagtggagactcttgatgaagaaggaagtgaaggtgatgatgatatgaatgatttt
attgtcgatgaggatggaagatctcttgcagaaaaacgtatgaaaaagaaaccaatattc
tcagatgctgcactacaagaagcacaagatatttttggggtagattttgattttgatgag
ttcggtaaatttggagaagaagattatgaagaagaagaagaagaagaagaagaagatgaa
tatttggatgatgatgttgatgaaagaccaagaagaccaaagaaacaatttaaaaagaaa
agcacaaggaaaagtatttttgaaatatatgagccaagtgagctgaagagaggtcatttc
acagacttagataatgagattcgtaatacagacattcccgaacgaatgcaacttcgttct
gttccctttacacctgtagctgaaggttctgatgaattagatcttgaagcagaatggata
tataaacaagcattttgccgacctaccatctctgttcaagatgctcacttaaatgaagaa
gctaaagaaagagctaagaaaggtccacaaactattgggaaaatcaaaaaggctttagat
tttatgtgcaatcaaaattttgaagtccctttcatttcattttatagaaaagaatacgta
cttccagagctaaatatcaatgatttatggaaagtatataaatttgatgccaaatggtgt
cagttacgtcaacgaaaagaaaatttattaaaattatttaaaaagatgagaaattatcag
ttggatgaaattatgaaaaatcctgatgctccattacctgataatgtgagagtaataaaa
gatgatgacattgaacgtcttaaaaatattcaaacaagcgaagaattaaatgatgtttat
caacattttatgctttattatagtcatgagataccagctatgcaggaagttgtacgccag
aaagaaagagaagcccgtcgtgaagctagaatccaaaagagaaaacaacaaatcgctgaa
gcagaagagaatggtgaaaatcctccagaagaagatatagaagcagcagaagaggaagaa
gaaccagatgaaacattaaaacaagcagtgagaagtggaccttattctacatgcagaaaa
gcaggattagatgctcttgctaaaaagtttggtcttactcctgaacatttcgcagaaaat
cttcgtgataattatcaacgtcacgaagtggatcaggaacctacagaacccattacagtt
gcaaatgatttttgtagtttaagattcaaaactccagatgaaattcttaaagctgcacaa
ttaatggttgcaatgcagttggcacgtgaaccattagtacgcaaatgtgtcagagaaatg
tatatggaaagagcaaagatatcaataagacctacaaaaaaaggtattaaagaaatagat
gagaaccatcctatatactctatgaaataccttaaagacaagccggtgcgtgatcttgtg
ggagatcagtttttaaaattgattatagctgaaacagacaaacttattactatttcgctt
agtgacacaatagaaggaaatacaacaagcaattatgttgatgaaatgaagcagctttat
tatagagatgaattcagcaaaaatgttcaagattggaatgctttaagagttggaagtgta
gaaatggctctgaatcgtatggtaataccacttttgaaaaaagaattgagaacaaatctt
gttatagaagcaaaggaatgtgtaatgagagcatgttgtcgtaaaatgtataattggatt
aaagtagctccatatacttgtgaattccctgaagaagaagatgaagaatgggacacaagt
aaaggtcttcgagtgatgggtttagcttatgtacctgattattctcaagcagcttttacg
tgcataatttctgctgatggtgaatgtacagattatgtaagattaccacatttgctgaag
agaaaaaatagttttagggaagatgaaaaagtcatgaaagaagctgatttattagcactt
aaaaattttattgcaacaaaaaaacctcatgtggttgtcataggtggtgaatcaagagaa
gcattaatgatagcatctgatgtaaaggaatgtatttcgaatctaatggaggatgaacaa
tttcccggcattcaagttgagatatgtgaaaatgaacttgctaaaatttattccaatagt
aataaaggtatatctgaatttagagattatccggaattactacgacaagctatatcttta
gcaagaagaatgcaggatcctttagtagaattttctcaattatgtactgcagatgaagaa
atactatgtcttaaatatcatccattacaagatcagcttcttaaggaagagcttttagaa
aatttgtatttagaatttgtaaatagagtaaatgaagttggtgttgatgttaataaagct
gtgcaacaagcttattcaggaaatttagtacaatttatatgtggcttgggtcctagaaaa
gggcaagcattaattaaaatattgaaacaaactaatcaaagattggaaaatagaacacaa
cttgtaacagcctgtcatatgggacctaaagtatttatcaattgtgctggctttataaaa
attgacacaaatagtttaggagacagtacagaagcgtacgtagaagtactagatggttca
agagtgcatcctgaaacatatgaatgggcaagaaaaatggcagtagatgctttggaatat
gatgatgaggatgcaaatccagctggtgctttagaagaaattctagaatcaccagaaaga
ttgaaagatttagacttggatgcatttgcagaagaattagaaagacaaggctttggcaat
aaatgcgttacattgtatgatattagagctgaattaaattctagatataaagatttacgt
atactatatcaatctccaagtccagaaaaattatttgatatattaactaaagaaacacct
gaaacattctatataggtaaattggtgttagcaacagtggttggtataagtcatagaaaa
ccacaaggagaacaattagatcaagccaatccagtcagaaatgatgaaactggtttatgg
cagtgtccattctgtcttaagaatgattttcctgagctttcagaagtgtggaatcatttt
gatgcaggagcttgtccaggaaaggctacaggtgtaagattaagattagacaatggaata
tctggctatattcatattaaaaatttatctgataagcatgttgctaatcctgaagaaaga
gtaagcataggtcaagtaattcactgccgcattatcaaaatcgaagtagaacgttttagt
gtggaatgtacgagcaaaagcagcgatctcgcggacaaaaatcatgaatggaggccacaa
agagatctttattatgatacagagacacacgatcaagacgtaaagatagaagaggatgct
aaaaaagtgaaacaacgtcagacatacgtaaaacgtgttattatacatccatctttccac
aatattagttttgcagaatcagagaagttaatgcaaaatatgaaacaaggagaaggcata
ataaggccaagcagtaaaggtgccgatcatttgactgtaacgtggaaagtaacagataat
atttatcaacacattgatgtaagagaagaaggcaaagaaaacgcattttccttgggacat
agtttatggataggtaatgaggaatttgaagatctagatgaaataattgctagacacgtc
aatccaatggctgcatatgcttcggaattattagattttaaatattataaagcaaatgtg
gaaggtgtaaaagataaagccgaagaaatattgaaagaacaaaagaaacaaaatccagga
ggaattccatatattatatctgcagctaagaattatccaggaaaattcctcctttcatat
ttacccagaattcgatgccgtcatgaatacgttagcgtttcaccagatggctttaaattt
agaggacaaatgtttagtagagttaatgatttattccgttggttcaaagaacattttcga
gatcctatacctggccaatctacaccaggtactccacatggtgctttgacttccaggaca
ccgtatcatactacacctggtgcagttacaggaatgaatcaagatgcaatacaaagagtg
gcacaaaatttaccacatcatatgttgcattccttgtcgcaagtagcaaatcagacacca
catcattatccaccacatactccaggggcagctagtaccacagcttatggtggaatacat
acgtatccaaatacaccttatactccttctggacaaactccattcatgactccatatcaa
acaccccatcatactccacatcacgcgcaacaaacatcgaaccatcatcaaggtcaattc
ttacatccagtatcgtcttcgataccatctgtaactcaaagatcaatgcgatctcacaga
cctactccatctatgtctacaccctcatctggggatgcgatggattggagtaaagcagcc
gaagcatgggcacgtttaaaacaatccactccacgaggatccactccaaggtacgaggaa
tctaggaaaacaccaaaaaattatgatgattccactggaaggacaactccaagaaataga
actccgtctaatcgcacgccatcctataaatcacctcgaggcacaccatttaccaattct
agtccacgaagtatgtctctcagtggagatggtactcctttatacgacgaaagttaa
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integrated database retrieval system
