KEGG   Vespa crabro (European hornet): 124423114
Entry
124423114         CDS       T09462                                 
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
  KO
K08735  DNA mismatch repair protein MSH2
Organism
vcrb  Vespa crabro (European hornet)
Pathway
vcrb03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vcrb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    124423114
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vcrb03400]
    124423114
DNA repair and recombination proteins [BR:vcrb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     124423114
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_II MutS_I CEP63
Other DBs
NCBI-GeneID: 124423114
NCBI-ProteinID: XP_046816474
LinkDB
Position
3:complement(11601289..11613040)
AA seq 926 aa
MYISLGYNINKNDLFYLCKNESRMKSNTAFQKSSSTIRFFNRGDYYTLHGSDALFAAKEV
FKTTSVCKMLGAEPHKTEGVILNKSHFEAFIRDLLLVKQYRVEVYINQGSSKNQNWVLEY
KGSPGNLSQFEDILFANNDIALGVSVIAIKLGIEGKSRIVGLSCLDTVATSFSVCEFQDS
ESFSNLETFIVTLNPKECLLVQGEGSYEFDTLKQVIERSNILVTLRKKSEFSSDSVVQDL
NTLIKFKKGQQQNAQSLPEVNLTLAMSATSALIKYLDLTSDEGNIHQFSLEQIKQSRYLK
LDTAAIKALNIEPRLDVSSNLNGNVPASILTLLDKCRTPQGHRLIAQWIRQPLTDLALIK
ERHDIVEVLVKNNELRSALSEDHLRRIPDLQQLAKKLCKKKAHLQDCYKIYMSVSHLPRL
IQQLSDASDITALKELIINPLKELVNDMDKFQQMIEQTIDLDAAEKGDFLVRPDFDDELK
ELKEEMNEMEEKVQSQLSKVADDLGLESGKSLKLETNQQFGYYFRITLKEEKVLRNKKNY
SILDSNKSGVRFRNNKLSELNDEYIAAREKYTTQQKTVVTEIIEIAAGYTSPIKSIGDVI
ACLDVLMAFALAAANAHKAYIRPEMLSSEHGEFNLIQVRHPCLEIQDGVDYIANDVYFKR
DEIHCYIITGPNMGGKSTYIRSAGVTALMAHIGSFVPCDKATISLLDCILARIGADDSQL
KGLSTFMMEMIETAAILRTATSNSLVIIDELGRGTSTYEGCGIAWSIAEHLAKEIKSYCL
FATHFHEVTRLSEEIPTVKNQHVTALVQNDKLTLLYKIKPGICDQSFGIHVAKMANFPNN
VIEFAKRKQTELEDYQGTVFEGSNCPEKKRKIIKEADGLIAEFLNKCKTLDKSLPNPELR
DKISEYKKEIRSHKNPYIEALLSEVL
NT seq 2781 nt   +upstreamnt  +downstreamnt
atgtacatatctttgggttataacataaataagaatgatttattttatttatgtaagaat
gaaagcaggatgaaaagtaatactgccttccagaaatcaagttctactatacgatttttt
aacagaggtgattattatacattacatggaagcgatgctttatttgctgccaaagaagtt
tttaaaacaacatctgtttgcaaaatgcttggtgctgaacctcataaaactgaaggtgtt
atattaaataaaagtcattttgaggcatttatacgtgacttattattagtaaaacaatat
agagtagaagtatacatcaatcaaggatcgtcaaaaaaccaaaactgggtattagaatat
aaaggatcacctggtaatctgtcacaatttgaagatatattatttgctaacaatgatatt
gcacttggagtgtcagtaattgctataaaattagggatagaaggaaaatccagaatcgta
ggtttaagctgtcttgataccgtagcaacttctttctcagtttgtgaattccaagatagt
gaatctttctcaaatttagaaacatttattgttacacttaatccaaaagaatgtttgcta
gtccagggagaaggtagttatgaatttgatactttaaagcaggtaatagaaagaagtaat
attttagttacattaagaaaaaagagcgagttttctagtgattcagttgtacaagattta
aatacattaatcaaatttaaaaaaggccagcaacaaaatgctcaatctttacctgaagta
aatttaacattagctatgtcagctacatctgcattaattaaatatttggatctgacatct
gatgaaggaaatattcatcaatttagcctagaacaaataaaacaatcacgctatttaaaa
ttggatacagcagctataaaagctcttaatattgagcctcgtttagatgtatcttctaat
ttaaatggaaatgtacctgcaagtattttgactttattggataaatgcagaactccacaa
ggtcatagattaattgcacaatggattagacagcctcttacagatttggcacttataaaa
gaaagacatgatattgtagaagtattagtcaaaaacaatgaattgagatctgcccttagc
gaagatcatttaagacgtataccagacttacaacaattagctaaaaaattatgtaaaaaa
aaggctcatcttcaagactgttacaaaatttatatgagcgtgtctcatttgccaagattg
atacaacaactttctgatgcttctgatataacagcattaaaagaattgattataaatcca
ttaaaagaacttgttaacgatatggataaatttcaacaaatgattgagcagactattgat
ttagatgcagcggaaaagggagattttttagtacgtccagattttgacgatgaattgaaa
gaactaaaggaagaaatgaatgaaatggaagaaaaagtacaatctcaattaagtaaagta
gctgatgatttgggtttagaatcaggaaaatcattaaaattggaaaccaatcaacagttt
ggatattactttcgaataacgttaaaggaagaaaaggtactaagaaataaaaagaattat
tctatattagactctaacaaaagtggtgtaagatttagaaataataaattaagtgaattg
aatgatgaatatattgctgctagagagaaatatacaactcaacagaaaactgttgttaca
gaaattattgaaattgcagccggatatactagtccgattaaaagtattggagacgttatc
gcgtgtcttgacgttctcatggcatttgccttagctgcagcaaacgcacataaagcatac
atacgcccagaaatgctttctagtgagcacggcgaatttaatcttattcaagtgagacat
ccttgtttggaaatacaagacggcgtagattatatcgctaacgacgtatatttcaaaaga
gatgagattcattgttacattataactggtccaaacatgggcggtaaaagtacctatata
cgttctgctggtgtaactgcattaatggcacacattggaagttttgttccttgtgataaa
gcaacaatatctttattggattgtatattagcaagaattggagctgatgattcacaatta
aaagggctctcaacgtttatgatggaaatgatagaaacagctgctattttaaggacagca
acatctaattcacttgtcattattgatgaacttggtagaggtacatcaacgtatgaagga
tgtggtattgcttggtccatagcagagcatctagcaaaagaaattaaatcttattgctta
tttgcaacacattttcacgaagttacgagactttctgaggaaatacctactgttaaaaat
caacacgtaacagctcttgtacaaaacgataaacttactttactttataagataaagcct
ggtatttgtgatcaaagctttggtattcatgttgctaagatggctaattttccaaataac
gtaatagagtttgctaagcgaaaacaaacagaattagaggattatcaaggaacagttttt
gaaggatctaattgtccagaaaaaaagcgaaaaattataaaggaagctgatggtttgata
gccgagtttctcaataaatgcaaaacattagataaatctttaccaaatccagaactaaga
gataagatctcagaatataaaaaagaaattcgttctcataaaaatccatatatcgaagca
ttattatcagaagttctctaa

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