Vespa crabro (European hornet): 124423114
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Entry
124423114 CDS
T09462
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
vcrb
Vespa crabro (European hornet)
Pathway
vcrb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vcrb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
124423114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcrb03400
]
124423114
DNA repair and recombination proteins [BR:
vcrb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
124423114
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
CEP63
Motif
Other DBs
NCBI-GeneID:
124423114
NCBI-ProteinID:
XP_046816474
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Position
3:complement(11601289..11613040)
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AA seq
926 aa
AA seq
DB search
MYISLGYNINKNDLFYLCKNESRMKSNTAFQKSSSTIRFFNRGDYYTLHGSDALFAAKEV
FKTTSVCKMLGAEPHKTEGVILNKSHFEAFIRDLLLVKQYRVEVYINQGSSKNQNWVLEY
KGSPGNLSQFEDILFANNDIALGVSVIAIKLGIEGKSRIVGLSCLDTVATSFSVCEFQDS
ESFSNLETFIVTLNPKECLLVQGEGSYEFDTLKQVIERSNILVTLRKKSEFSSDSVVQDL
NTLIKFKKGQQQNAQSLPEVNLTLAMSATSALIKYLDLTSDEGNIHQFSLEQIKQSRYLK
LDTAAIKALNIEPRLDVSSNLNGNVPASILTLLDKCRTPQGHRLIAQWIRQPLTDLALIK
ERHDIVEVLVKNNELRSALSEDHLRRIPDLQQLAKKLCKKKAHLQDCYKIYMSVSHLPRL
IQQLSDASDITALKELIINPLKELVNDMDKFQQMIEQTIDLDAAEKGDFLVRPDFDDELK
ELKEEMNEMEEKVQSQLSKVADDLGLESGKSLKLETNQQFGYYFRITLKEEKVLRNKKNY
SILDSNKSGVRFRNNKLSELNDEYIAAREKYTTQQKTVVTEIIEIAAGYTSPIKSIGDVI
ACLDVLMAFALAAANAHKAYIRPEMLSSEHGEFNLIQVRHPCLEIQDGVDYIANDVYFKR
DEIHCYIITGPNMGGKSTYIRSAGVTALMAHIGSFVPCDKATISLLDCILARIGADDSQL
KGLSTFMMEMIETAAILRTATSNSLVIIDELGRGTSTYEGCGIAWSIAEHLAKEIKSYCL
FATHFHEVTRLSEEIPTVKNQHVTALVQNDKLTLLYKIKPGICDQSFGIHVAKMANFPNN
VIEFAKRKQTELEDYQGTVFEGSNCPEKKRKIIKEADGLIAEFLNKCKTLDKSLPNPELR
DKISEYKKEIRSHKNPYIEALLSEVL
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgtacatatctttgggttataacataaataagaatgatttattttatttatgtaagaat
gaaagcaggatgaaaagtaatactgccttccagaaatcaagttctactatacgatttttt
aacagaggtgattattatacattacatggaagcgatgctttatttgctgccaaagaagtt
tttaaaacaacatctgtttgcaaaatgcttggtgctgaacctcataaaactgaaggtgtt
atattaaataaaagtcattttgaggcatttatacgtgacttattattagtaaaacaatat
agagtagaagtatacatcaatcaaggatcgtcaaaaaaccaaaactgggtattagaatat
aaaggatcacctggtaatctgtcacaatttgaagatatattatttgctaacaatgatatt
gcacttggagtgtcagtaattgctataaaattagggatagaaggaaaatccagaatcgta
ggtttaagctgtcttgataccgtagcaacttctttctcagtttgtgaattccaagatagt
gaatctttctcaaatttagaaacatttattgttacacttaatccaaaagaatgtttgcta
gtccagggagaaggtagttatgaatttgatactttaaagcaggtaatagaaagaagtaat
attttagttacattaagaaaaaagagcgagttttctagtgattcagttgtacaagattta
aatacattaatcaaatttaaaaaaggccagcaacaaaatgctcaatctttacctgaagta
aatttaacattagctatgtcagctacatctgcattaattaaatatttggatctgacatct
gatgaaggaaatattcatcaatttagcctagaacaaataaaacaatcacgctatttaaaa
ttggatacagcagctataaaagctcttaatattgagcctcgtttagatgtatcttctaat
ttaaatggaaatgtacctgcaagtattttgactttattggataaatgcagaactccacaa
ggtcatagattaattgcacaatggattagacagcctcttacagatttggcacttataaaa
gaaagacatgatattgtagaagtattagtcaaaaacaatgaattgagatctgcccttagc
gaagatcatttaagacgtataccagacttacaacaattagctaaaaaattatgtaaaaaa
aaggctcatcttcaagactgttacaaaatttatatgagcgtgtctcatttgccaagattg
atacaacaactttctgatgcttctgatataacagcattaaaagaattgattataaatcca
ttaaaagaacttgttaacgatatggataaatttcaacaaatgattgagcagactattgat
ttagatgcagcggaaaagggagattttttagtacgtccagattttgacgatgaattgaaa
gaactaaaggaagaaatgaatgaaatggaagaaaaagtacaatctcaattaagtaaagta
gctgatgatttgggtttagaatcaggaaaatcattaaaattggaaaccaatcaacagttt
ggatattactttcgaataacgttaaaggaagaaaaggtactaagaaataaaaagaattat
tctatattagactctaacaaaagtggtgtaagatttagaaataataaattaagtgaattg
aatgatgaatatattgctgctagagagaaatatacaactcaacagaaaactgttgttaca
gaaattattgaaattgcagccggatatactagtccgattaaaagtattggagacgttatc
gcgtgtcttgacgttctcatggcatttgccttagctgcagcaaacgcacataaagcatac
atacgcccagaaatgctttctagtgagcacggcgaatttaatcttattcaagtgagacat
ccttgtttggaaatacaagacggcgtagattatatcgctaacgacgtatatttcaaaaga
gatgagattcattgttacattataactggtccaaacatgggcggtaaaagtacctatata
cgttctgctggtgtaactgcattaatggcacacattggaagttttgttccttgtgataaa
gcaacaatatctttattggattgtatattagcaagaattggagctgatgattcacaatta
aaagggctctcaacgtttatgatggaaatgatagaaacagctgctattttaaggacagca
acatctaattcacttgtcattattgatgaacttggtagaggtacatcaacgtatgaagga
tgtggtattgcttggtccatagcagagcatctagcaaaagaaattaaatcttattgctta
tttgcaacacattttcacgaagttacgagactttctgaggaaatacctactgttaaaaat
caacacgtaacagctcttgtacaaaacgataaacttactttactttataagataaagcct
ggtatttgtgatcaaagctttggtattcatgttgctaagatggctaattttccaaataac
gtaatagagtttgctaagcgaaaacaaacagaattagaggattatcaaggaacagttttt
gaaggatctaattgtccagaaaaaaagcgaaaaattataaaggaagctgatggtttgata
gccgagtttctcaataaatgcaaaacattagataaatctttaccaaatccagaactaaga
gataagatctcagaatataaaaaagaaattcgttctcataaaaatccatatatcgaagca
ttattatcagaagttctctaa
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